Carassius gibelio (silver crucian carp): 128029012
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Entry
128029012 CDS
T08819
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128029012
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
ROBO family
128029012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_C17orf99
VID27_N
Motif
Other DBs
NCBI-GeneID:
128029012
NCBI-ProteinID:
XP_052472415
LinkDB
All DBs
Position
A15:complement(5642836..5879456)
Genome browser
AA seq
1682 aa
AA seq
DB search
MQVTWSGITVLIISILLQFVQSELSEGPLVPDTGTQEGTSNRATEAPTAEHDDDNSLGYT
GSRLRQEDYAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRS
HRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPV
DVMVAAGEPAVMECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKLMITNTRKTDAGK
YVCVGTNMMGERESEIAELTVLERPSFLRKPSGQSVLVDQSVEFRCEAQGDPVPTIRWRK
EDGDLPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASATLTVHVPPVFVVRP
RNQVVGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITA
VERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPPIVRQGPTNQTVAVDGTVVLGCQ
ATGTPTPTILWRKDGILVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEASWK
AYLEVQEFGAPVQPGRPTDPNLIPSAPFKPEVTDVSRTSVSLSWKPNLNAGATPTSYVIE
AFSHATGSSWQTLADHVKMESFVLKGLKPSAIYLFLVRAANAYGLSDPSPITDAVKTQDV
PPTSQGVDHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGFKVMYRPSPEG
AQQRVEWAMFEVRTLGENSALVTQLKKGVTYEFKVRPFFNEFQGTDSDIKVGKTLEEAPS
AAPRGVTVTGSGDNGTAILVSWQPPPEEEQNGMVQEYKIWCLGNESRYHINRTVDGSTHS
VLIPGLLAGVRYRVEVAASTGAGPGVKSEATSFQLDSSGRVLSPALGEDDTFSQQISDVV
RQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGE
AVSSAGRPGLLNMGEPATQPWLADTWPNSCSNHNDCTINCCTGSNGNSDSNLATYSRPAD
CIANYSNQMDNKATNLLAPDTGLYSDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYA
TTQLIQSSLANNSVNSSSGGSADLNEKQSWKSSQGTPQKQPDINTPLQYNVMEQNKLNKD
HYRVEGPISGTIPYNQTQDVLTGGTYSSSDRGSSTSGSQGQKKGGRTTKQAKQNTMNWTE
LLPSPPVNLAPCQEYTLMMDDSYDTDLQCPLPPSRMYLQPDELEEEEEEVELERGPTPPV
RGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQENPDLHERRRLLVSPPPPPRPFSPPHT
YGYISSPLGLDTDGLEEEEDEEEGDETDAEVARVHQLHNHPHQQHLPQQRALLRGLEQTP
ASSTCDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVAAAAEYA
GLRVAKHPGKGHHQLPVSGAARKYPNFPAGHRPGSPVSTDSNVSTAPGQRRPLKRQKQHP
AAQTGYQRREVFTEDLPPPPIPPPAMLKSPTHPAKTIPEGPRGAMPPRSSSADGKDKRTG
SGGPRPRDGSDTRTSSSERREGQDVQKGQRTGKSNKQDAGASHKSRQQPEDILPYSRPSF
PAVHSPRGERDPSSSSSLSSRGSGGRRRGEGAPGTRRNPADFGLNTIGAFQTGGEELEMV
ES
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcacatggtcaggtatcacagtcctcatcatttccatcttgttgcagtttgtc
cagtcagagctgtcggaaggtcctttggttccagacacggggactcaggaggggactagc
aatagggccacagaggcccccactgcagaacacgatgacgacaactctctgggctataca
gggtcccgtttgcggcaggaagattacgcaccccgcattgtagaacacccctctgatctg
atcgtatctaagggtgaaccggccaccctaaactgcaaggccgagggtcgtcccacccct
actgtggagtggtacaaggatggagagcgtgtggaaacggaccgggacaaccctcgatcc
caccgcatgctcctgcccagcggctcgctcttctttctgcgaatcgtacacggccgtcgc
agcaaacccgacgaaggctcctacgtttgcgtggcccgtaactacctgggagaagcagtt
agccacaacgcctcactggaagtagctattcttcgagatgatttcagacagaaccctgtg
gacgtgatggtggcggcgggtgagccagcggtcatggagtgccagccgccccgcggacac
ccagaacccaccatctcctggaaaaaagatggagtcaacatagatgacagagacgagagg
ataacgatacggggaggaaaactaatgattaccaacaccagaaaaacggatgcagggaag
tacgtgtgtgtgggaaccaacatgatgggggaacgggagagcgagatcgcagagttgacc
gttcttgagaggcccagttttttgcgaaagccgagcggtcagtctgttttggtggaccag
agtgtggagttcagatgtgaagctcaaggagatcccgtgcccaccatccgctggaggaaa
gaggacggagatcttcccaagggaaggcatgagatctgggaggaccacacgctcaaactg
aagagactgacatcaggagacgccggcacttacacctgtcaggcggagaacatgatgggg
aagacggaggccagcgccaccctcaccgtccacgttcctcctgtgtttgtggtgcgaccc
aggaatcaagtggtcggtatgggtcgcaccgtgacctttcaatgcgaagccacaggaagt
cctcagcctgccatattttggcagaaagaaggcagtcagaaccttctgttctcctctcag
cctcctcctccttccagtcgcttctctgtctctcagacgggtgatctgaccatcacagcg
gtggagcgttcggacggaggatactacagctgtcaggctctgaacatcgctggcagtgtg
atcaccaaagccctgctggaggttacagacgtgatctcagacagacctccacccatcgtc
cgccagggtcccaccaaccagaccgtggctgtggatgggacggtggtcctgggatgccaa
gccaccggcacgccgactcccaccatcctgtggaggaaagacggcatcctggtgtccacc
cacgactctcgcctcaaacagctggacacgggagccctgcagatccgttacgcaaagctg
ggagacactggcatgtacacctgcaccgcgtccacccccagcggagaggcgtcgtggaaa
gcttacctggaggtgcaagagtttggtgctccggttcagccgggccgacccacagatccc
aacctcatccccagcgcccccttcaaaccagaggtcacggatgtcagccgcacctctgtg
tctctgtcctggaagcccaacctgaacgctggagccacgcccacctcctacgtcatagaa
gccttcagccatgcgacgggcagcagctggcagacgctcgcggatcatgtgaagatggag
agcttcgtcctaaagggtctgaagcccagcgccatctacctgttcctggtgagagcggct
aatgcgtacggcctgagtgacccgagccccatcaccgacgcggtcaaaacacaagatgtc
ccaccaaccagtcagggagtggaccacgggcagatccagagggagctgggagatgttgtc
attcacctccacaatcccacgattctctcctcatcatctgtcagagtacagtggactgtc
gagcagcagtctcagtacattcagggctttaaggtgatgtaccggccgtctccagagggc
gctcagcagcgggtggaatgggccatgtttgaggttcgaaccctgggggagaacagcgca
ctcgtcacccagctcaagaagggcgtgacctatgagttcaaagtccgacctttcttcaac
gagttccaaggcacagacagcgacatcaaagtgggcaagaccctggaggaagcgcccagc
gccgctcccaggggggtcactgtaacaggaagtggagacaacggcacagctatcctggta
tcctggcaaccgcccccagaggaggagcagaacggcatggtgcaggagtataagatctgg
tgtctgggtaacgaaagccgataccacattaaccgcacggtggatggatccacacactcg
gttctgattcccggcctgctcgcgggggtcaggtacagggtggaggtggcagccagcacc
ggggccggtcccggggtcaagagcgaggctacgtccttccagctggactcttcaggccgt
gttctttcgccggctctgggcgaagacgatacgttttcccagcagatctcagacgttgtg
cgtcaaccggccttcatcgcgggcatcggcgcggcctgctggatcatcctcatggtcttc
agcatctggctgtaccgtcaccgtaagaagaggaacggcctgagcagcagctacgccggc
atccgcaaagtgccctccttcaccttcacccccacagtggcatatcagagaggaggagaa
gccgtcagcagtgctggaaggccaggtttgttgaatatgggtgaaccagctacccagccc
tggctcgcggacacatggccgaacagctgctccaatcacaatgactgcaccatcaactgc
tgcaccggcagcaacggaaacagtgacagcaacctggccacctacagccgcccagctgac
tgcatcgccaactacagcaaccagatggacaacaaggccaccaacctactggctcccgac
acgggcctttacagcgacgtggacctctccaacaagatcaatgagatgaagaccttcaac
agccccaacctgaaggacggccgtttcgtgggacccggcggtcagcctacgccctacgcc
accacccagctcatccagtccagcctggccaacaacagcgtgaacagcagcagcggagga
agtgccgaccttaacgagaagcagagctggaagagcagccagggaacacctcaaaaacag
ccagacatcaacacaccactgcagtataacgtcatggaacagaacaaactgaataaggac
cactatcgagtcgaggggcccatctcaggcaccatcccctataaccagacccaggacgtc
ctcacaggaggaacctacagcagctccgacagggggagcagcacctctggaagtcaagga
cagaaaaaaggtgggcgaacaactaaacaggccaaacagaacacaatgaattggaccgaa
ctattgccttctcctccggttaatctagcaccgtgtcaggaatacaccctcatgatggac
gacagttatgacacagatctgcagtgccctttgcctccgtctcgtatgtatctgcaacct
gacgaactagaagaggaggaggaagaggtggagctggagcgtggaccaacaccgcccgta
cggggagctgcttcctcacctgccgctgtgtcctacagtcaccagtccaccgcgaccctc
accccgtcccctcaagaggagatgcagccaatgctgcaggagaaccctgacctacacgag
cgcaggcgactcttggtgagcccacctcctccaccacggcccttctcccctccacacacg
tacggctacatatccagccccctgggtcttgacacagacggtctggaggaagaagaggac
gaggaagagggtgacgagacggatgcggaggtggctcgagtccaccagctccacaaccac
cctcaccagcaacacttgccccagcagagggctctcctgcggggcctggaacagaccccg
gcctccagcacctgtgacctggagagctccgtcaccgggtctatgatcaacggctggggc
tcggcttcagaggaggacaacgcctcgtcgggtcgctccagcgccgtcagctcatcagac
ggatctttctttaccgatgctgatttcgcccaggctgtagcagctgcagcagaatatgct
ggtttacgagtggcaaagcatcctgggaaaggccaccatcagctaccagtgtctggagca
gcacggaaatacccaaacttcccagcgggacaccgtccaggcagcccagtgtccacagac
agtaacgttagcacagccccgggtcagaggaggcctctaaagagacaaaaacaacatcca
gctgctcagacaggctaccagcgccgagaggtcttcacagaggatcttccgcctcctccg
attcctcctccagccatgctgaagtctccaacacacccagctaaaaccatcccagagggc
ccacggggggccatgccgcccagatccagttctgctgatggcaaggacaagcgaacgggt
tcgggcggacccagaccccgggatggctcggacactcggaccagctcttcagaacggagg
gagggccaggatgtacagaagggtcagagaactgggaaaagcaacaaacaggatgcgggt
gcaagccataagagtcgccagcagccagaggacatcctaccttacagtcgcccatctttc
ccagccgtccacagtcctcgtggagaaagggacccaagctcctccagttcactgtcctct
cgaggatccggtggacggcggagaggtgaaggggctccggggacccgcagaaaccctgca
gattttgggctgaacaccataggagccttccagacaggaggggaggagcttgagatggtg
gagagctga
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integrated database retrieval system
