Carassius gibelio (silver crucian carp): 128029038
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Entry
128029038 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128029038
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128029038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_6
zf-RING_5
zf-RING_2
ANCHR-like_BBOX
DLP_helical
DUF4407
Motif
Other DBs
NCBI-GeneID:
128029038
NCBI-ProteinID:
XP_052472460
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All DBs
Position
A15:complement(6982545..6987778)
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AA seq
549 aa
AA seq
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MSESAASQYEDQFICSVCLDRLKEPVMIPCGHSYCMSCITDCWGQKEQEPPYCCPQCRES
FSQRPLLKKNTLIAEMMETLQKTSLQTTAVECDVCTTEKSRAVKTCLQCLASFCQTHLQP
HYQSPAFMKHKLVPASRNIQENICLSHGKPLEIYCQDDHQCICCMCTDNHKGHSVVYVDS
EWTIKKKELEEMKEAHQKLIQERERGQQELSEAVKHLKSSAQEAVEDIEKVFTELICSLE
KKRSEIKDQIRDQEKTEIDRAEKLHKHLDQELTELRKTQAEIEKLLITDDQIHCLKSCQS
VCVLPSYKDVPSFTQHTHLSFKDISISAFREVLEDVCQQQTARISRDVSNVHVAESPEPK
TPDEFLQYFRQLKLDPNTAHKNIILSEKNKKASYSDEVQQYPDHPERFDEYCNVLCSEGL
CGRCYWEVECSGDIWGVAVCYKGIGRKGNNDDCRLGFNKTSWRLSRYQQNICFIHDNKQV
SIPVVPSSRIGVYLDQRAGTLCFYSVSETMTLLHRVQTTFTEPLYPACGVLHGSYVRIIK
KRRVQTVQK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctgcagcgagtcagtatgaggatcagttcatctgttcagtctgtttggat
cgcctgaaggagccggtgatgattccctgtggacacagttactgtatgagctgcattact
gactgctggggccagaaggagcaggagccgccgtactgctgtccccaatgcagagagagc
ttcagtcagagacctctactgaagaagaacactctgatagcggagatgatggagacgctg
cagaagacgtctctacaaacaactgctgtggagtgtgatgtttgcactacagagaagagc
agagctgtaaagacctgtctgcagtgcttggcctccttctgtcaaactcacctgcagcct
cactatcaatctcctgcgtttatgaagcacaaactagtcccagcctccagaaacattcag
gagaacatctgcctcagtcatgggaaacctcttgagatttactgtcaggatgaccatcag
tgcatttgttgcatgtgtactgataatcataaaggacacagtgttgtgtatgtggattca
gaatggactattaaaaagaaagaattagaggagatgaaggaggcgcatcagaagctgatc
caggaacgagagagaggtcagcaggaactcagtgaagctgttaaacatcttaaaagttca
gcacaagaggccgtggaggacattgagaaggtattcactgagctcatctgctctctggag
aagaaacgctctgagattaaagatcagatcagagatcaggagaagactgagatagatcga
gcagagaaactccacaaacacctggatcaagagctgacagaactcagaaaaacacaagca
gagattgagaaacttctgattactgacgatcagatccactgtctgaagagctgtcagtct
gtgtgtgttttaccctcatataaagacgttcccagcttcactcaacacactcatctgtct
tttaaagacatttcaatctcagcattcagagaggttttggaggacgtctgtcaacagcaa
acagccagaatatctcgagacgtgtcaaacgtccatgttgcagagtctccagaacctaaa
actccagatgaatttttgcagtatttccgtcaactgaaactggatccaaacactgcacac
aaaaatatcatcttgtcagaaaaaaacaaaaaagcatcatattcagatgaagtccagcaa
tatcctgatcacccagagcgatttgatgaatattgtaatgtcctctgtagtgagggtttg
tgcggtcgctgttactgggaggttgagtgcagtggggatatttggggtgtagcagtttgt
tacaaaggaattggacgtaaaggaaacaatgatgactgcagacttggcttcaacaaaaca
tcatggagattgtcccgctatcaacagaatatctgtttcatacatgataacaagcaagtc
tcaatccctgttgtcccttcctctagaataggagtgtatctggatcagagagcaggaact
ctgtgcttctacagcgtctctgaaacaatgactctcctacacagagtccagaccacattc
actgaacccctctaccctgcatgtggggttttacatggttcatatgtcaggattattaaa
aagagaagggttcagacagtccagaaataa
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integrated database retrieval system
