Carassius gibelio (silver crucian carp): 128029076
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Entry
128029076 CDS
T08819
Name
(RefSeq) polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128029076
03041 Spliceosome [BR:
cgib03041
]
128029076
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128029076
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128029076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128029076
NCBI-ProteinID:
XP_052472515
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All DBs
Position
A2:17297695..17308882
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AA seq
575 aa
AA seq
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MDGRLDTDLYPLGSSYVTEIDSVHDITVGTKRGSDELFSSCISNGPYIMSSGAANGNDSK
KFKGDIRSPGIPSRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEE
SAQTMVSYYSSVTPVIRNHPIYMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMPLS
TVVDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALVQYS
DAMTAQHSKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPSF
NAQSMAAAALNAPGIISASPYAGAHGFPQTFAIQQAAGLSLQGMSAGAFAQLGVPGAAAA
AAAAAAAGRLSLSGYNAGGNSVMLVSNLNPESVTPQCLFILFGVYGDVMRVKILFNKKEN
ALVQMSDGTQAQLAMSHLNGQKLYGKALRVTLSKHTNVQLPREGHEDQGLTKDYSNSPLH
RFKKPGSKNYSNIFPPSSTLHLSNIPPSVTEDHLRGLFLNAGAVVKAFKFFQKDRKMALI
QLGSVDEAIESLIKFHNHDLGENHHLRVSFSKSTI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgtttagacactgatttgtatcctctgggatccagttacgtcactgaaata
gacagtgtccatgatataacagtcggcacaaagaggggatctgacgaactcttttcctct
tgcatatctaacggaccttatataatgagctctggagcagcaaatggtaatgacagcaag
aagttcaaaggtgacatcaggagtccaggcattccttcacgagtcattcatgtacgcaaa
ctgccaaatgacataaacgaggcagaggtcatttctttggggcttccctttggcaaagtg
acgaacctcctgatgctgaaaggaaagaaccaggctttcctggagatgaatactgaggag
tcagcacagaccatggtcagctactactcctctgtcactcctgtcatccgcaaccaccca
atctacatgcagtattccaaccacaaggagctaaagactgacaactcacccaaccaagtt
agagcacaagcagcactgcaggcggttaatgcggtccagacaggaagcatgcctttgagc
actgttgttgatggagcaggcatggggagtcagagccctgtgctgagagtcattgttgaa
aacctcttctatccagttactcttgatgtccttcaccagatcttctcaaagtttggcaca
gttttgaagattataacctttaccaaaaacaaccagttccaagcactggttcagtactcg
gatgcaatgactgctcagcattcaaaactgtctttagatggacagaacatctacaatgcc
tgctgtacccttcgcatcagtttctcgaagctcaccagcttgaatgttaagtacaacaac
gataagagcagggactacactcgccctgacttgcctacaggagacagtcaaccctccttc
aatgcacagtcgatggctgcagctgccttgaatgctcctggtatcatctctgcatcacca
tatgctggggctcatggttttccacagacgtttgccattcagcaggcagcaggtctgtct
ctgcagggtatgtctgctggggctttcgcgcagcttggtgtccctggtgccgcggcggct
gccgctgcagcggctgctgcaggacgcctgagtctttcaggttataacgctggtggaaac
agtgtcatgctggtcagcaacctcaaccctgagagcgttacgccccaatgcctctttatt
cttttcggtgtgtatggtgacgtcatgagagtgaagatcctattcaacaagaaagaaaat
gctttggtgcagatgtctgatggaacccaagcccagctagccatgagccacttgaatggg
cagaagctgtatgggaaggctttgcgggtcactctttccaaacacaccaatgtgcagctg
ccacgtgaaggccatgaggatcaggggctcaccaaggactacagcaactctcctcttcac
cgcttcaaaaagccaggctccaagaactattccaacatcttccccccttcctctactctc
catctttccaatataccaccttccgtcactgaggatcatctcagaggcttgtttctaaat
gcaggagctgttgttaaggcctttaagtttttccagaaagacagaaaaatggctctcatc
cagttgggctctgtggacgaagcaatcgagtcgctgatcaaatttcacaatcatgaccta
ggagagaaccatcacctcagagtgtctttctccaagtccaccatctaa
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