Carassius gibelio (silver crucian carp): 128029078
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Entry
128029078 CDS
T08819
Name
(RefSeq) platelet-derived growth factor D-like isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
cgib04510
Focal adhesion
cgib04540
Gap junction
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgib04052
]
128029078
Cytokines and neuropeptides [BR:
cgib04052
]
Cytokines
Growth factors (RTK binding)
128029078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
128029078
NCBI-ProteinID:
XP_052472516
LinkDB
All DBs
Position
A15:8035165..8063744
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AA seq
407 aa
AA seq
DB search
MHRFSGSTDALRCGGKPGSMRRFWVTDQRAARFQIMWLLVCSFMAVLSGENYATQAQVMS
SRALRTSNTRSSVTDSNRLTDLYRKEEVIMVNGGGHVQSPRFPSSYPRNLLLSWKLLSPP
HTRILLEFDAQFGLEEAEHGVCRYDYVEVEDISETSTIIWGSWCGQRAPSRIISKTNLIK
ITFKSDDYFVAKPGFKICYSLLSGSVFQDNAPLASLTNWEAVTVMSDFREVSGTDTPLSA
SALDHDIASVSTVEELLRHMNPFTWEEDLEQLYTHTHTHYYRPRAFHSDRRHKLDLDLLY
DDVKQYSCTPRNFSVNLREELKTTNAVFFPRCLLVQRCGGNCACGTDNWNSCSCSAGKTV
KKLHEVLKFSPGPNFYRMKTRAHWVLEEIYLQHHERCDCVCQSRPPR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggttctccggatccacggacgctctgcgctgcggtggaaagcccgggtccatg
cggcgcttctgggtcacggatcagcgggcggctcggttccagatcatgtggctgctcgtg
tgctccttcatggcggtgctgagcggtgagaactacgccacacaggcccaggtgatgtcc
tccagagccctgaggacctcaaacacacgcagcagtgtaacagacagcaatcgcctcaca
gacttgtaccggaaggaagaggtcataatggtcaacggaggaggtcacgtccagagcccg
cgcttccccagctcttacccccgaaacctgctgttgtcatggaaactgctctcgccgccg
cacacgcgcatcctgctggaattcgatgctcagtttggactggaggaggcggagcatgga
gtctgcaggtatgattatgtggaagttgaggatatttctgaaaccagcaccatcatctgg
ggcagctggtgtggtcaaagagctccgtcacggatcatatccaaaacaaacctcatcaaa
atcacctttaaatcagacgattacttcgtagcaaaaccaggattcaaaatctgctattca
ctgctgtctgggtctgtttttcaggacaatgcacctctcgcttctctgaccaactgggaa
gcagttacagtgatgtcagattttagggaggtttctgggacggacacaccgctgtctgcg
agcgcgctggaccacgacatcgccagcgtcagcacagtggaggagttactgagacacatg
aaccccttcacctgggaggaagacctggagcagctctacacacacacacacacacactac
tacagaccacgagctttccacagcgaccgcagacacaagcttgacctcgaccttctctat
gatgacgtgaagcagtacagctgcactccgcgcaatttctcggtgaatctccgcgaggag
ctgaagacgaccaacgccgtgtttttcccacgatgcctcctggtgcagcgctgcggggga
aactgcgcctgtggcaccgacaactggaactcctgcagctgcagcgccggaaaaaccgtc
aagaaactacacgaggtgctgaagttttctccaggtccaaatttctacaggatgaaaaca
cgagctcactgggttctggaggagatttacctgcagcatcatgagagatgtgactgtgtg
tgtcagtccagaccgccgcgatga
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