Carassius gibelio (silver crucian carp): 128029086
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Entry
128029086 CDS
T08819
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04136
Autophagy - other
cgib04140
Autophagy - animal
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128029086
04136 Autophagy - other
128029086
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128029086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128029086
03029 Mitochondrial biogenesis [BR:
cgib03029
]
128029086
Membrane trafficking [BR:
cgib04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
128029086
Others
Specific organelles associated proteins
Auto phagosome
128029086
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128029086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
PUMA_CC
Ge1_WD40
KASH_CCD
DUF4200
Beta-prop_DCAF12
PspA_IM30
DUF6212
ADIP
Tup_N
HALZ
HEF_HK
Lipoprotein_6
NET2A
Motif
Other DBs
NCBI-GeneID:
128029086
NCBI-ProteinID:
XP_052472540
LinkDB
All DBs
Position
A15:8286658..8305630
Genome browser
AA seq
619 aa
AA seq
DB search
MAGRRVECLWKHHVMEQLKQRDRVQRQAFEEIIHQYNRLLERSDLQVVFSERLQTEKYEH
QNRHDLSPGVEGGRSDSLQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKMQEYQHQISHLEGECRDLRNSLADLERANQTLRDEYDALQITFSALEEKLRKT
TEDNQELVTRWMAEKAQEANKLNAENEKDTRRRQAKLQKDLAEAAKEPLPIEPDDDIEVL
SEDAGKATGETSPSRQTSRTPSRRASQPPPAGLLDSISNIFGLSDSVQPGLVPSDSRRRS
VNSFGSSPESAEVPSSCADVRVPSTALHVFDAHDGEVNAVRFSPGSRLLATGGMDRRVKL
WEVASGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDFRLRHTLTGHS
GKVLSARFLLDYTRIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFD
KKIRFWDIRSESNVHELELLGRITSLDLNHDRTELLSCSRDDLVKIIDLRSNAVRQTFNA
QGFKCGSDFTRVTFSPDGSYVAAGSADGVLYIWNVLTGKLDKTLDKGHSSAINSVSWSPS
GVYVASVGKGSKAVLWSDM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgtagagtcgagtgtttgtggaaacatcatgttatggagcagctgaagcag
agagacagagttcagcgtcaggcctttgaggagatcatacaccagtataaccggttgtta
gagaggtctgatcttcaggttgttttttctgaacgtctccagaccgagaaatatgagcat
cagaaccgacacgacctcagtccgggcgtcgagggcggtcgcagtgattccctgcagcag
gaaatggctcagatgagaattaaacatcaagaggagctaacggagctgcacaagaaacga
ggagagttggcccagagcgtgattgaactaaacaaccagattcagcagaaagacaaagag
atccagagtaatgaagccaagatgcaggagtatcagcatcagatctctcatctggaagga
gagtgtcgcgatctgcgcaactctctggccgatctggaacgagccaatcagacgcttcga
gacgagtacgatgccctgcagatcacgttcagtgctctggaggagaaactacggaaaacc
acagaggacaatcaggagctggtgacacgctggatggccgagaaagcgcaggaggccaac
aaactcaacgctgagaacgagaaggacaccagacgcagacaggcgaagcttcagaaggat
ctggcggaagcagcgaaggaacctcttcctatagagccagatgatgacatcgaagttctc
tcagaggatgctgggaaggcaacgggtgaaacgtcaccgagcagacagaccagtcgcaca
cccagcagacgagcgtctcagcctcctcctgctggactgctggattccatctctaatatc
tttggcttgtctgattctgtccaacctggtctcgtcccatctgactccaggcgtcgctcg
gtgaattcgttcggctcgtctcctgaaagcgcggaggtgccgtcatcctgcgctgatgtc
cgagttccctccactgcgctccacgtctttgacgcccacgatggagaagtgaacgccgtg
aggttcagtcctggttcccgtctgcttgccacgggaggaatggaccgcagggtgaagctc
tgggaggtcgcttctgggcgttgtgaacctaaaggtgcgctgacgggcagtaatgctgga
atcaccagtatagagtttgacagtgcgggctcgtatctactggctgcgtcgaatgatttc
gccagcagaatctggacggttgatgacttcaggctgcggcacacgctcacagggcacagc
gggaaggttttatctgcacggtttctcctcgattacactcggatcgtctccggcagctac
gatcgaacgctcaagctctgggatttacgcagcaaagtctgcatgaagacggtgtttgct
ggctctagctgtaatgacatcgtctgcacggagcagtgtgtgatgagcggacacttcgat
aagaagattcgtttctgggacatcaggtctgagagtaacgttcatgagctggagttactg
ggacgcattacatctctggatctcaatcacgaccggaccgagctgctgagctgctctcgt
gacgatctggtgaagatcatcgatctgcgcagtaatgcagtgcgacagacgtttaatgct
caaggcttcaagtgcggttcagacttcaccagggtcacgttcagtcctgatgggagttat
gtggcggctggttctgcagacggcgttctgtacatctggaacgttctgacggggaaacta
gacaagacccttgataagggtcacagttctgccataaactcggtgtcctggtctccatcg
ggtgtgtacgtggccagcgttgggaaaggaagcaaggccgtgctctggtctgacatgtga
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