Carassius gibelio (silver crucian carp): 128029163
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Entry
128029163 CDS
T08819
Name
(RefSeq) scavenger receptor class F member 1-like
KO
K24318
scavenger receptor class F member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128029163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128029163
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Scavenger receptors
128029163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
128029163
NCBI-ProteinID:
XP_052472716
LinkDB
All DBs
Position
A15:10110588..10121559
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AA seq
894 aa
AA seq
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MDIFLTSFGLMLMCVHCSTQTLSLTGKNVCLSVRDYSPICCSGWGQNGNECTIPLCEGER
TCLQDEVCVYPGLCRCKPGFYGYQCKTPCPPEFWGPDCRELCACHPHGLCDPVTGVCSCL
PNRWGNLCQNGCNCGRHGKCDPVYGNCTCEEGWWTSTCSKACQCQLGKSTCDQATGRCLC
NSGYWGQKCSLKCNCYVSPCQQYTKVCQCLHGWWGPSCDRRCICDLSHADCDLQTGNCLC
YPGYKEPFCNEPCDSGKYGRGCKKSCGHCEGGRSCSKQDGLCDACAPGWNGTRCDQPCPA
GYYGHHCREICPHCRNMDPCDPGTGACSHCDPGWTGPRCDKPCTDGTYGDGCRFLCKTCH
HGHCDHVTGSCICLPGFQGESCNSTCPPNLYGINCSSTCDCGNHACHPATGACPNSSRAG
LLAGLLIPLCILILALLFCCCCCGRPVEGKEGVVVGDGSPAVRMKHHVYTALANMGSAMP
CMSLWSSGLPRVTVSHHDPELTFNHSFIEQPSSGWVTDSFETDDEGEVVYCEPPREDVLT
VAGGELQELNSKCNFFPDPSTFSSEDMSQDFGIPRTSSIAKSKRPSVSFAEGTKFSPKER
RGSTQDLPGTNRKPKTWGVLMISALQGGQGNHTETETQKEEKNNEETISSEEQAAASETS
QTDSERYSSGPLRTHLTVPSGRRRTLSNTRKNAQPSDSGQEADSDRITTIYVTVGKTQKI
AKQETPSEGPVQAMLRRLGSLQRQKEEGVQPKGRGQAIAKPPRRKLGARASAWEQATGSN
QSEVVMRKPSRRKHNSLSSPCTVGTTDFPQENSTPKRPLSSILKSVPESNTPHSLEVEQD
TEVVCETDSLTEHTYETVAPSDGVSTSSEIIINETVVDQAENEPNYENVYVKHS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggacatctttctgacctcatttggattgatgctcatgtgtgtccattgctcaactcag
acactctctctgactgggaaaaatgtctgcctcagtgtcagggattattctcccatatgt
tgttctggatggggccagaacggtaatgaatgcacaatccccctctgtgagggagaaagg
acctgtctgcaggatgaagtgtgtgtataccctggactttgtcgatgtaaacctggattt
tacgggtatcagtgcaaaaccccttgtcctcctgaattttgggggccggattgtcgagag
ctctgtgcctgtcaccctcatgggctctgtgacccagtcactggtgtgtgctcgtgcctg
cctaaccgctggggcaacctgtgccaaaacggctgcaattgtggacgtcatgggaaatgc
gaccctgtctatggcaactgcacatgcgaggagggctggtggacatctacttgctccaaa
gcctgtcagtgccaacttggcaaatccacttgtgaccaagccacaggacgctgcctgtgt
aacagcggctactggggccaaaagtgcagcctgaaatgcaactgctatgtgtccccttgc
cagcagtacacaaaggtctgtcagtgcctgcatggctggtggggtccatcctgtgaccgc
cgttgcatttgtgatctcagccatgctgactgtgacctgcaaactggaaactgtctctgc
tacccgggttacaaagagcctttctgcaatgagccttgtgacagtggaaagtatggcaga
ggctgtaagaagagctgtggacactgtgaaggaggcaggtcttgctcgaaacaggacggc
ctgtgtgatgcctgtgcaccaggttggaatggaactcgctgcgatcagccttgtcctgca
ggttattatggccatcactgccgagagatttgtccgcattgcagaaacatggacccatgt
gacccgggaactggagcgtgctcacactgtgatcctggttggactggaccgagatgtgac
aaaccctgcacagatggtacatacggagatggctgtcgcttcctgtgtaaaacctgccat
cacggccactgtgaccatgtgacaggaagttgtatttgtcttcctggctttcagggtgag
agctgtaacagtacatgtccccctaacctgtatggcatcaactgctcctccacatgtgac
tgtgggaatcatgcctgccatccagccacaggggcttgtccaaacagtagcagggcaggt
ctgttggcagggcttttgattcccttgtgcattttaatacttgccttgctgttctgctgc
tgctgttgtgggcggcccgttgaagggaaggaaggagtggtggttggagatggtagccct
gcggtccgcatgaagcatcatgtttatactgcgctagccaacatgggctcagcaatgccg
tgcatgagtctctggtcatctggtttgccgagggttacagtctctcatcatgaccctgag
ctcacatttaaccatagcttcattgaacaaccatcgtccggctgggtgactgattcattt
gaaactgatgatgaaggagaggtcgtctactgtgaacccccccgggaagatgttcttact
gtggctggtggagagcttcaggagttaaactctaagtgtaacttcttccctgacccatca
accttcagcagcgaggacatgtcgcaagattttggtatccctcgtacctccagcattgcc
aaatccaaacgtccttcggtctcttttgcagagggcacaaagttcagtcctaaagagcgc
cgtggctcaactcaagatctgccaggaactaatcgcaaacccaagacctggggtgtgctg
atgatctctgccctgcaaggaggacagggaaaccacactgaaacagaaacacaaaaagaa
gagaaaaacaacgaggagaccatctcctctgaggagcaagcagctgcatctgaaacatca
caaactgactcggaaagatatagttctggcccgctaaggactcacctcactgtgcccagt
gggagacgacgtacactttccaataccaggaaaaatgcccagccatctgatagtggccag
gaggcagattcagataggataacaaccatatatgttactgtgggtaagacccaaaagata
gccaagcaagagaccccctcagaagggcccgttcaggcaatgctgcgcagactgggtagc
ttacagagacaaaaagaagagggcgtccagcccaaaggaagggggcaggcaatcgccaag
ccacctcggaggaaactgggagcgcgggccagtgcatgggagcaagctacagggtcaaac
cagtcagaggtggtcatgaggaaacctagtcgcaggaaacacaactccctcagctctccc
tgcactgtgggcacaacagactttcctcaggagaacagcacccccaagaggccattgtcc
tccattttaaaaagtgttccagaaagcaatacaccccatagtttggaggtggagcaagac
actgaagtagtttgtgagacagacagtctgacagagcacacgtatgagactgtggctccg
tctgatggggtctccacatcttcagagattattattaatgagacagttgtggaccaagca
gaaaatgagccaaattatgagaatgtttatgtaaagcattcataa
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