Carassius gibelio (silver crucian carp): 128029194
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Entry
128029194 CDS
T08819
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128029194
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
EARP complex
128029194
Endosome - Golgi transport
Tethering complex
GARP complex
128029194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
hAT-like_RNase-H
COG3_N
Tropomyosin
O_Spanin_T7
FUSC
DUF677
VPS51_Exo84_N
Med11
MCPsignal
ING
Motif
Other DBs
NCBI-GeneID:
128029194
NCBI-ProteinID:
XP_052472769
LinkDB
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Position
A15:11597037..11616887
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AA seq
832 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINSLFPTEQSLAN
IDEVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFLRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRARAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNNGPGQKKPETPLEPTNPFLEDESREDNGSEKDEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSTSSGGLTISSLLKEKEGSEV
AKFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRS
EQSTMLELFRQRLSNPPSGPDGGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgaagaattagagtttgtggaagatttggaggcgatattacaccttact
ccagaagtgcagctggccattgagcaggttttccccagccaggaccctttggatcgagct
gacttcaatgcggttgaatacattaacagcttgtttccaacagaacagtctttggcgaat
atagatgaagtggtgaataacattcgacttaaaatcagacggttggatgacaacatcagg
acagtggtgaggggacagactaatgtggggcaggatggcagacaggcgttggaggaggcc
cagaaagccatccagcaactcttcggaaaaatcaaagacatcaaagacaaagcggagaaa
tcggagcaaatggtgaaagagatcacacgggacatcaagcagctggaccatgcgaagcgt
cacctgaccacttctattaccaccctcaatcacctgcacatgctggctggcggagtggac
tctcttgaagctatgactcgaaagaggcagtatggggaggtggccaatctccttcagggt
gtagtcaacgtgctcgagcacttccagaagtacatgggcatcccccagattcgccagctc
tcagaaagagttaaagcagcacagagcgagcttggcacgcagatactggccgactttgaa
gagacttttcctgcccaggggtcaaagaaatctggaggccctagcattgttctcagagat
gcctgcttggtggcaaatgtcctggatcctcggattaagcaggagatcatcaaaaagttt
ctcaggcagcacctttcagaatacctggtgctcttccaagaaaaccaggatgtggcgtgg
ctcgacaagatagaccggcgctatgcgtggatcaagcgtcagcttgtggactatgaagaa
aagtatgggcgaatgtttcctgaggagtggtgcatgactgaacgcatcgctgtggagttc
tgtcatatcaccagaaccgagctggccaagctgatgcgagcccgtgccagggagatcgag
gtcaagcttttgctctttgctattcagaggaccaccaattttgaaggactgctggctaag
cgcttctcaggctgcaccttaaacaacgggcctgggcagaaaaaacctgagacccctctt
gaaccaacaaacccctttttggaagacgagtcaagagaggacaacggatcagaaaaggat
gaagatttggatagaccaaagaagcccaaggctccagacaaccccttccatggcatcgtg
tccaagtgctttgagcctcatctctacgtttacatcgagtcgcaggataaaaatcttggt
gagctgatcgaccgttttgttgctgatttccgggcacagggtccccctaaatcagggaca
gatgagggaggtgctgtgctccccagctgtgcagatctcttcgtgtactacaagaagtgt
atggtccagtgctcgcagctgagcaccggagaacccatgattgctttgaccaccatcttc
cagaagtatctgcgcgaatatgcctggaagatcctctctgggaacctaccaaagaccagc
accagtagtggtggtctgaccatcagcagcttgctgaaggagaaagagggatcagaagtg
gccaagttcacaatggaggagttgtgtcttatttgcagcatcttaagcacggctgaatac
tgcctggctaccacacagcagctggaggagaagctcaaggagaaggtggacaagtcccta
atggagagaatcaatttaactggggagatggacacttttagcacggtcatctcaaacagt
atccagctcttggttcaggatctggatgctgcatgtgatccagccctcacagcaatgagc
aagatgccgtggcagagtgtggaacatgtgggagaccaaagcccgtatgtgacctctgta
atcatgcacatcaaacaaaatgtgcccattatcagagacaacctggcctccacccggaaa
tacttcacccagttctgcattaagttcaccaactccttcattccaaagttcatcaaccac
ctgttcaggtgtaagccaatcagcatggttggagcagagcagttactcctggacacacat
tccctcaagaccgttcttctagacctcccctccattggctctcaggtggtccgtaaagcc
ccggccagctacaccaaaatagtggttaaaggaatgactcgagcggagatgatcctcaag
gtggtcatggcccctcacgagccgtccgtggtctttgtggacaactacatcaagctcctt
gctgacagcaatcctgagacgttccaaaagattctagatatgaagggcctgaaacggagt
gagcagagcaccatgctggagcttttcagacagaggttgtctaatccgccatcaggacca
gacggtggcccatcattgtccttcagcgcccccacccctgaacaagaatcttcccggatc
cgcaaactggaaaagctcattaaaaagaggattcagtaa
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