Carassius gibelio (silver crucian carp): 128029228
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Entry
128029228 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, kainate 4-like
KO
K05204
glutamate receptor, ionotropic kainate 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128029228
04082 Neuroactive ligand signaling
128029228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128029228
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
128029228
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128029228
NCBI-ProteinID:
XP_052472831
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All DBs
Position
A15:complement(12478194..12785889)
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AA seq
963 aa
AA seq
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MLGAWAPLLFLAMWVRNATSGPLSFRLAAILDDPMECSRGERLAITLAKDSINRSSNRST
TGKLEVDIFELLRDSEYETGETMCQIMSKGVVAVLGPSASPASNSIISNICGEKEVPYVK
VAPEDILKVQFPRFTTLDLRPTNTDISMAVAGLLTFFNSSTSCLICAQADCLLNLEVLLR
QFLISKETLSVRMLDDSQDPTPLLKEIRDDKTATIIVDANATMSHVILERASELGMLSVY
YTYILTSLEFSLLRLDDLADQRVNIVGFSVFNRTHPFFQDFVLSLNRSWQENCDHAPFAG
TPLSSALLFDAVHTVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLT
GHIEFNSKGQRSNYALRIMQNSRDGLRQIGQWHSEQGLSMERKLPSLNVTDTLFNTTLTI
TTILENPYVMLRASHQELEGNERYEGFCVDMLKELADILKFKYRIRLVGDGVYGVSGTNG
TWTGMVGELISRKADLAVAALTITAEREKVIDFSKPYMTLGISIMYRVHIGRRPGYFSFL
DPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFWFP
VGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLA
DQTSIEYGTMHGGSTMTFFQNSRYQTYQRMWNFMYSKQPSVFVKSTEEGIARVLNSNYAY
LLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPLGTVYRDEFDLAILKLQEENRLEILK
RKWWDGGKCPKEEDHRAKGLGMENIGGIFVVLVCGLLVAIFMAVLEFVWMLRHTPGTELS
VCEEMLRELQGIVLCQESLQLRRRRGASVLRPQPLPLDERRARAAAASLSNGKLCTGTGL
PEPLSHRLAQEAALVARGCSHIRICPECRRFQGIRVRPAGPPSPSPSEESIEWEKGTNNS
EHE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgctcggagcctgggcgcctctgctctttttagccatgtgggtgagaaacgccaccagt
ggcccactctcattcagattagctgccattcttgatgacccgatggagtgtagccgcggg
gagcgattggccatcactctggcgaaagacagcatcaaccgttccagcaaccgctccacc
acaggcaaactagaggtggacatttttgagctgctccgagacagtgaatacgagacaggg
gaaactatgtgccagatcatgtcgaagggggttgtggcggtcctgggcccctctgccagt
ccggcatctaactctatcatcagtaatatctgcggtgagaaagaggtgccatacgtgaaa
gtggctccggaggacatactgaaagtacagtttcctcgctttaccacactggacctcagg
ccaactaatacagacatcagcatggctgtagctggactgctaacattcttcaacagcagc
acttcatgtctcatatgtgctcaggccgattgcctattaaacctggaggtgttactgcga
cagtttctcatctccaaggaaaccctttccgttcgcatgctggatgacagccaagatccc
accccccttctcaaggagatccgtgatgacaagactgccaccatcatagtggatgccaat
gccaccatgtctcacgttattttggaaagggcctcggagttggggatgctgtcagtgtac
tacacctacatcctgacttcattggaattctctttgctacgattggatgatttagctgat
cagcgagtcaacatcgtcgggttttcagtcttcaacagaacacatcctttctttcaggac
ttcgtcctcagcctcaatcgatcctggcaggagaattgtgatcatgctccttttgcagga
acaccactttcgtcagcgctgctgtttgatgcggtacacacggtggtggcagccgtgcag
gagctgaaccgtagccagaacgtaggagccacgcagctctcctgcaagtcctctaagatc
tgggagcacggcacaagtctgatgaactacctgaggatggtagagttggaaggtctaaca
ggccacattgagttcaacagcaaaggccagcgctcgaactatgccctccggatcatgcag
aacagcagggatggcctaaggcagatcggtcagtggcattcagagcagggactgtccatg
gagaggaagcttccatcacttaacgtgacagatacactattcaacaccactctcaccata
actaccatcctggagaatccatatgtaatgttaagagccagtcaccaggaactagaaggg
aatgagcgttatgaaggcttttgcgtggacatgctgaaggagttggcagatatcctgaag
ttcaagtaccgtattcggctagttggggacggcgtgtacggagtgtcaggaaccaatggc
acctggacaggcatggtgggagagctcatcagcaggaaggctgacttggctgtggccgcc
ctgaccatcacggctgaaagagagaaggtcattgatttctccaaaccctacatgactctg
gggatcagcatcatgtaccgagtgcacataggaagaagaccgggatatttctcctttttg
gatccgttctctcctggggtttggcttttcatgttgctggcatacctggcagtcagctgc
gtgctctttttggtggcaaggctaacaccttatgaatggtacaaccctcacccctgcctg
aaggggcgctgtagcctgctcattaaccagtattctctgggcaacagtttctggtttcct
gtgggaggtttcatgcagcagggatccactatcgcccctagagccctgtccacacgttgc
gtcagtggagtatggtgggccttcaccttgatcatcatctcttcctacacagccaacttg
gcggcctttctcactgttcagagaatggaggtgcccatcgagtccgtggacgatttggct
gaccagacgtccatagaatacggtaccatgcacggtggatccaccatgaccttcttccag
aactctcgctaccagacgtaccagcgcatgtggaacttcatgtactccaagcagcccagc
gtgttcgtgaagagcactgaggagggcatcgccagagtgctcaactctaattatgcctac
ctgctggagagcaccatgaacgagtactaccgccagcgcaactgcaacctcacccagatt
ggaggcctgctggacaccaagggctatggcattggcatgcctctgggcacggtctacaga
gatgagtttgacctggccatactcaagttacaggaggaaaaccgcctagaaatcctgaag
aggaagtggtgggatggtggcaagtgtccgaaagaggaggatcatcgagcaaaaggtctg
ggcatggagaacatcggtgggatcttcgtggtgcttgtgtgtggtcttctggtggccatc
ttcatggcggtgctggagtttgtatggatgcttcgtcatacgccaggaacagagctgtcc
gtgtgtgaggagatgctacgagagctgcagggcatcgtgctgtgtcaggagagcctgcag
ttacggcgcagacgcggagccagtgtgttgcgaccgcagcctctgcccctggacgagcga
cgggcgcgggcagcagcagcgagcctcagcaatggcaagctgtgcacgggcaccggcctg
cccgaacccctctcccacagactggcgcaggaggccgccctggtggcacgagggtgcagt
cacattcgcatctgcccagagtgccggcgcttccagggcattcgagtgcgcccggctggc
cctccatcgcccagccccagcgaggagagtatagagtgggagaagggcaccaacaacagt
gaacatgaataa
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