Carassius gibelio (silver crucian carp): 128029319
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Entry
128029319 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04217
Necroptosis
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128029319
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128029319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128029319
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128029319
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128029319
Multi subunit type E3
LUBAC complex
128029319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
UBA
SPATA2_PUB-like
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
128029319
NCBI-ProteinID:
XP_052473000
LinkDB
All DBs
Position
A2:complement(18005126..18025131)
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AA seq
1055 aa
AA seq
DB search
MASLSDQLEELRVNVEVSLSTPGSAQEMRAGVTAMANIPLPPSSKYRYIAAESMLTENSN
GNNKKESLSLLQKLSTALNILEKYGSNLTNPNRPKYWRTVKYNNPVFRTTVDSIQGGRAV
LNLYGYTDQQQDGLSFPDDVVQPDVGKVASVTLEVMCLRMELDMLIKGTHPYPEFFERLI
PSLRVLDEGISTDAVTFSPSESPWEKQTPSPALTPLEPKSPFSPAHSLSSQVPSNQTEIC
TICGIFPVSAHCPTCTQRLCLECDRLYHSHSGRSTHIRIPVTSSKATKRLSSSLSTWQCS
YCTTVNTVQQVLCETCDRPRLSSAAPSLQEEPSQPSTISEWQCKSCTVVNAGSSILCEVC
ERPRLATRPPVTPSRPTPSSAGLMDSQWVCQFCTYVNHTLSPVCEMCCLSRSEPALSLPK
PLPLSPVKDITPLPAPPKVIPTEDPDFKRQRLMREEGLKLIQIIREGEKKGVSPEEVYTS
MCVSGNSNVTPYDWLKAELPHVLDEICVMAASYQQEPNTQSNCLGGDNGQDGQKSNAVPL
SRAEAKRAWLAAGGDNEKAVRQALRARRVKVKELGSLGFNDVTRCEEALRQSGGDVRGAL
ALLQRPLLEPFHQRMWSDEPEPPIDINHPDKQHVCRRLLAMFDLPSWGRCELVLSLLRDP
TATYTLEDVVQAVRESPDRDFIRRVLNKECPICLSVFPHSKMRSLTSCQCSVCCGCFKQH
FTIAVRDKHIRDMVCPVCTEPDINNPEHLNSYFSTLDIQLRDCLEPDVYDLFHKKLTEQA
LIKDPKFLWCSHCSYGFIYDGDQLKVTCMQCRKSFCAQCKKPWEPQHMGLSCEQFQLWKR
ENDPEYQRQGLAGYLRDNGITCPNCRFQYALARGGCMHFSCSQCRYQFCSGCNNPFHTTC
AVNQCTVTGLHAHHPRDCLFYLRDWEPARLQALLQKKGVNYNTDTAPGAQTGVCGVIEQK
DEGPRPTDSPCGAQTQPAQAGLCEKHYREYLVSLINGHSIDPAHLYTLDELTVACRRYHV
DVRQGDGEDERAYFARLLKKLMDDVPLGDKVLRKK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctcagtgatcagctggaggagctgagggtgaatgtggaagtcagcttgtct
actccaggttctgcccaggagatgagggcaggggtgacagccatggccaacatccccctc
ccaccctccagcaaataccgctacatcgctgctgaaagcatgttgacggagaacagtaat
ggaaataataaaaaggagtccctcagcctcttgcagaagctttccaccgctcttaacatc
ttggagaagtatggctccaatcttaccaaccccaacaggccgaagtactggcgtacagta
aagtacaacaatcctgtcttcaggaccactgtagattctattcagggtggcagagcagta
ctcaacctttatggctacaccgatcagcagcaagatggcttgagctttcctgatgatgtt
gtccagccagatgttgggaaggtggcatcagtgactcttgaggtcatgtgtctccgtatg
gagctggacatgctaatcaagggtacccatccttatccagagttttttgaaagacttatt
ccctccctcagagtgctggatgagggaatcagcacagatgcagttaccttctctcctagt
gaaagtccatgggaaaaacaaactccctcgcctgcattgactcctcttgaacctaaatct
ccattcagtccagcccactctctctcttctcaagtgccctctaatcaaacagagatctgc
accatatgtggtatatttccggtgtctgctcactgtcccacctgtactcagcggctgtgc
ttagaatgtgacaggctttatcactcccattcagggcgttccacgcacattaggattcct
gtgacttcctcaaaagccacaaaacggctcagctcatcgctgtcaacatggcagtgttca
tactgcactacagtaaatacggttcagcaggttttgtgtgaaacctgtgatcgaccccgc
ttgtcctctgctgcgccatctctacaggaagagccatctcagccctctacaatatctgaa
tggcaatgtaaaagctgcactgtggtgaatgcaggcagcagcattctgtgcgaggtgtgt
gagcgccctcgtcttgccaccagaccccctgtcacaccctcacgtccgaccccctcctct
gcaggactcatggacagccagtgggtttgccagttttgtacgtatgtcaaccacacacta
tcacctgtatgcgaaatgtgttgtctgtcgaggtcagagcctgctctgtcactccctaag
ccccttccactctcaccagtcaaggacatcacaccgcttccagcgccacctaaagtcatt
cccactgaggaccctgatttcaaaaggcaaagactgatgagggaggaagggcttaaactt
attcagatcattcgtgagggagagaagaaaggagtgagcccagaggaggtttacaccagc
atgtgtgtatcaggaaacagtaatgtaacaccgtatgattggctgaaagccgagctacct
catgtgcttgatgagatctgtgtgatggcggcatcctatcagcaagaacccaacacacaa
tcaaactgtttagggggggacaatggccaggatggacaaaagagcaatgcagtgcccctg
tccagagcagaagctaaacgggcctggctggcagcagggggcgacaatgagaaggctgtc
agacaggctctcagagcccgaagagttaaagtaaaagagcttggctctctgggctttaat
gatgtgacccgctgtgaagaagccctgcggcagagtggaggggatgtgaggggggctctt
gctctgctgcagcgccctttactggagccattccatcagcgcatgtggagtgacgaacca
gagccccccattgacatcaaccatcctgataaacagcatgtttgccgtaggctgctagca
atgtttgacctgcccagctgggggcgctgtgagctggttctgtctttgctgcgggacccc
acagccacatacacactggaggatgtggttcaggcagtgcgtgaatcacctgaccgggac
ttcattcgccgtgtgctgaataaggaatgccccatctgtctgtcagtttttccccacagc
aagatgcggtctctgacatcgtgccagtgttccgtgtgctgtggatgtttcaagcagcat
ttcaccatagcggtgagggacaagcacatcagagacatggtgtgtcctgtctgcacagag
cctgacatcaacaaccctgagcacctgaatagctacttctccactctggacatacagctc
agggattgtcttgagccggatgtgtacgatcttttccacaagaagctgactgagcaggct
ctcatcaaggacccaaagttcctgtggtgcagccattgttcatatggcttcatctatgac
ggcgatcaactcaaggtcacctgtatgcagtgcaggaaaagcttctgtgcgcagtgcaaa
aaaccgtgggagccgcagcacatggggctctcgtgcgagcagttccagctgtggaagcga
gagaatgaccccgagtaccagaggcagggcttggcaggatacctgcgtgacaatgggatc
acttgccctaactgcaggttccagtatgccctggccaggggtggatgtatgcacttcagt
tgttcccagtgcaggtatcagttctgcagtggatgcaacaaccccttccacacaacgtgt
gcagtgaaccagtgtactgtgacaggtctgcatgcccatcaccccagagactgcctcttc
tacctccgagactgggagcctgccaggcttcaggccttactgcagaaaaagggggtgaac
tacaatactgacactgcaccaggagcacagactggtgtgtgtggagtgatcgagcagaaa
gatgaagggcctcgtccgactgattcgccgtgtggggctcaaactcagccagcccaggca
ggactctgcgagaagcattatcgagagtatctggtcagcctcattaatgggcattctatt
gaccccgcccacctttacactcttgatgagctgactgtggcctgcaggagataccacgtg
gatgtcagacagggggacggagaagacgagagagcatactttgccagactgcttaagaaa
ctcatggatgacgtgcctctgggtgacaaggtccttcgcaagaaatga
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