Carassius gibelio (silver crucian carp): 128029346
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Entry
128029346 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 1A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128029346
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128029346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128029346
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
128029346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
GRP
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
128029346
NCBI-ProteinID:
XP_052473058
LinkDB
All DBs
Position
A15:16137125..16140606
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AA seq
258 aa
AA seq
DB search
MSAEMSGGVIRGPAGNNDCRIYVGNLPPDIRSKDVEDVFYKYGAIRDIDLKNRRGGPPFA
FVEFEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGGGGGAPRG
RYGPPSRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTY
AVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRR
SRGSPQYSPRHSRSRSRS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaaatgtctggcggtgtgatccgcggccctgctggaaacaacgactgccgc
atctatgtgggaaacctgccgcctgatatccgctctaaagatgtcgaagatgtcttctac
aagtacggagccattcgagacattgatctgaaaaaccgacgaggtggacctccattcgcc
tttgtcgagtttgaagacccgagagatgctgaagatgctgtttatgcccgtgatggctat
gactacgatggctatcgtcttcgagtggagtttcccagaagcgggagaggaggatttggt
ggtggtggtggcggcggtggaggaggaggtggtggtggtggtggtggggctcctaggggt
agatatggacccccatccagacgttcagagtacagagtaattgtttcagggcttccacag
agcgggagctggcaggatctgaaggatcacatgcgtgaagcaggtgatgtatgttacgct
gacgttttccgtgatggcactggtgtggtggagtttgttcgcaaagaagacatgacctac
gccgttcgcaaactggataacacaaaattccggtcacatgagggagaaactgcatacatc
cgtgtgaaggtggatggtccccgcagtccgagctatggaagatcaaggtcaaggagccgc
agtcgcagcaggagtcgcagccgcagcaacaaccgtagccgaagctactccccacgccgc
agtcgaggatccccgcagtactcccctcgccatagccgttcccgctctcgctcctaa
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