Carassius gibelio (silver crucian carp): 128029371
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Entry
128029371 CDS
T08819
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04514
Cell adhesion molecules
cgib04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128029371
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128029371
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128029371
04090 CD molecules [BR:
cgib04090
]
128029371
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Nectin family
128029371
CD molecules [BR:
cgib04090
]
Proteins
128029371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
C2-set_2
I-set
Mucin
Izumo-Ig
stn_TNFRSF12A
TM_ErbB1
Alpha_GJ
Motif
Other DBs
NCBI-GeneID:
128029371
NCBI-ProteinID:
XP_052473089
LinkDB
All DBs
Position
A15:complement(16514108..16553012)
Genome browser
AA seq
562 aa
AA seq
DB search
MAEEVRHIFGNSTFFHGLLPFIGLLLSVCTGVWANRVVVPEQVTAVLGKNVTLTCRVEVS
TNLSLTQSSWERRLPSGTTTLAVFNPQYGTSISDEYSKRVHFINPSVHDASIVLQGMGFA
DIGTYTCKAVTFQLGNMQASTTVDIMVEPKVYLSPGPLSLLDGRGQTLVATCTAERARPA
AEVFWDSDLPGQQSAVVTQQEPEGTTTTSVHYVWAPTRDAFGRSLSCVVRHPALSKDFHI
PYRLNVFFVPEVMVIGLQDVWYVGQKDVQLDCRASANPPALLFLWTRLDAPMPAGLDTSN
GSLLFTRPLEPSDSGQYRCEVQNDVGQSFKDVRFLVQEPPPTTAATSTSSSTSTSTSTST
SSSSKSILPDTSSTITAPINQHAHFTAPTRASPPDSGLGTILGGAVGGILILVLLMALVG
AFYMRQRRTFRGDYYTKQYIGPSDMQKESQMDVLQPHELQDVYGDDSGNGSQDLKPIPEG
DIIYPDYSTDHKDMEGWEDNLSLQRESSYYSDQHNHHNVNPSGPPLHNGSPYLQDECYDN
GTDRDYVSHVDGSVISRREWYV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagtaagacacatctttgggaatagcacgtttttccatggacttctacct
tttattgggcttctgctgagtgtctgcactggtgtgtgggccaacagagttgttgttcct
gagcaggtgactgcagtgctggggaaaaacgttactttgacctgcagggtagaggtcagc
acaaacctcagcctgacccagagttcctgggaacgccggcttccctccggcaccaccact
ttggctgtcttcaacccccagtacgggacctccatatctgatgagtacagcaaacgggtg
cacttcatcaacccctcagtgcatgatgcatccattgtcctgcagggcatggggtttgca
gacattgggacctatacttgtaaagcggtcaccttccaacttggaaacatgcaagcatcc
acaactgtggacattatggtggagccaaaggtatatttgtctcctggccccttgtctctg
ttggatggacgtggtcaaactctggtggcgacatgtacagctgaaagggctcgtccagca
gcagaggtcttctgggattcagacctgccaggccagcagtcagcagtcgtcacacagcag
gagcctgaaggcactaccaccacttcagtccactacgtctgggcccccacccgggatgca
tttggccggtccctcagctgcgttgttcgtcacccggccttatccaaggatttccacatt
ccctaccggctcaatgtgttttttgttccagaggttatggtgataggcctgcaggacgtg
tggtacgtgggacaaaaagatgtacagctggactgtcgagccagtgccaacccacctgct
ctcttgttcctctggaccagactggacgcaccaatgcctgcaggtttggacacatctaat
ggcagcctgctgtttactcgtcctttagagccgagcgactccggacaatacaggtgtgaa
gtacagaacgatgtcgggcagagctttaaggatgtacgcttcttggtacaagagccgcca
ccaaccaccgcagccaccagcaccagctccagcaccagcaccagcaccagcaccagcacc
agctccagcagcaagtccatcctgcctgacaccagctcaaccatcacagctcccatcaac
caacatgcccacttcaccgccccgactcgggcctctccgccggacagcggcctgggcact
atcctgggtggtgctgttggcgggatcctgatcctagtgttgctgatggcgctggtgggg
gctttctacatgcgacaacgccggacattcagaggagactactacaccaaacagtacatc
ggcccatccgacatgcaaaaagagtcacaaatggacgtccttcaaccccatgagcttcag
gacgtttacggcgacgactcgggcaacggcagccaagacttgaagcccattcccgaagga
gacattatctatcccgattactccactgaccacaaagacatggagggctgggaagacaat
ctcagccttcagagagagagctcgtattactccgaccaacacaaccatcataacgtgaac
cccagcgggccgccgctacacaacggctccccttacctgcaggacgagtgctacgacaac
ggcacggacagggactacgtgtctcacgtcgatggatctgtgatttcacgcagggaatgg
tatgtttaa
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