Carassius gibelio (silver crucian carp): 128029400
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Entry
128029400 CDS
T08819
Name
(RefSeq) cell adhesion molecule DSCAM-like isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128029400
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
DSCAM family
128029400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
V-set_CD47
C1-set
Sp38
Interfer-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
128029400
NCBI-ProteinID:
XP_052473140
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All DBs
Position
A15:complement(21315871..21448151)
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AA seq
2020 aa
AA seq
DB search
MWILAFLFLQSILNVFGEDLRSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPAALRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEEYVSVVSWEKDTVSLVSGPRYLITSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFERREVKVGH
RVELPCKASGHPLPRYRWLRDNSPLESDSRYHQSVSGLLIEATRPSDAGSYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRSSVGSQVSLFCSVTGSDEYEIAWYRNAEKIYQGINV
RITGINNENLVMEGMAKSDGGAYQCFARNGKMSTQDLVQVVLEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPTVTWTLDDDPVIKDSNHRMDRIITTEGHVLSYLNVSHTQVTDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNVTAIAGRDTYIHCRIIGYPYYSIKWYKD
SNLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVISGDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWNHSKGSGVPQFQPIALNSGSRIQLLEKGSLLIKHVLEEDSGFYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVTV
KEVGDEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNTPITGYDINYKNKSSSWASSQMTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLEAISSQSIKVTWKPPHKHLQNGLIRS
YQVCYREFGTGGSPQYNTINVDTTGDTETLTLDNLKKYTQYEVRVQAANRAGMGPTTEEI
TITTLEDVPSRPPENVVTTATTPETISLSWSALTKEALNGMLLGYRVIYWANLPDGELGE
IRNITTTKPSLELERLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
STSSVVFVSWLPPLKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRLTNLNQNWQYSI
WVVAVTAAGRGNTSEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCKAVGDPPPTVKW
LKGNNGTPAPVSIDGRRSAHSNGSFVIRTVKAEDSGYYRCVASNNWGSDEIILNLQVQVP
PDQPRLTVTKTTTTSITLTWIPGDNGGSSIRGYILQYSEDNSEEWGSFSISPSERSYRLE
KLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCSIDSFTLEYRPVDTTKWTMVKRDSLTKNHILYDLQEATWYELQMRVGNSAGTAEK
KVLFATLNVNGSTIAPLPKTVVPSQKNRQGNEGLKMMVTIICILVAISMGFIVLLVLRRR
RREQRLKRLRDAKSLAEMLMSKNARTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHPPVSSHTLSTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSLT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGAASS
GREATGQTCMDPQKSRMAKRPALLAPTPSETPSSALSSSGPPSREAVQQWQPGTASTLPQ
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcatttctctttctccagagcatcctgaatgttttcggtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcaccaca
ggggcactggtgccgtgtcctgccgcggccgtgccccccgccgcgctgcgctggtacctt
gccaccggcgaggagatctacgatgtcccaggcatccgccatgtgcaccccaatggcacg
ctgcagatctacggcttcctgccatccagctttagtaacctaatcaatgacaatacatac
tactgcacagcggaaaacccatctggaaagatcaggagccaagatctacacattaaggcc
gtattccgggagccatacacagtgcgggtggctgatcagagagtcatgcgagggaatacg
gcggtcttcaagtgcattatcccggcctcagtagaggagtacgtcagtgttgtatcgtgg
gagaaagacacagtctcacttgtctcaggaccaagatatcttattacatccacgggggcc
ttgtatattttggatgtgcagtcagaagatgcagtgaatatttatcgctgtaccacacgg
cacagatacacaggggagaccagacagagcaacagtgcccgacttcttttatcagaaccg
gtggactctgctccggtaattctggatgggtttgaacgaagggaagttaaggtgggtcat
cgggtggagctcccgtgtaaagcgtccggtcaccccctgcccagatatcgctggctgagg
gacaacagccccttagaatcagacagccggtaccaccagagtgtatctggccttctcatc
gaggccacacgacccagtgacgcaggcagttatgtgtgtgaggtgtggaacagcttcggg
aatgccaaagtggttggacggctggtggttaaacagcctctgaaagcagtggtgagccca
cggaaggtgagaagcagcgtaggtagccaagtgtcactgttctgcagtgtgactggctct
gacgagtatgaaatcgcctggtacaggaatgctgagaagatctatcagggtataaacgta
cgtatcacgggcatcaacaatgagaacctggtgatggagggaatggccaagagtgatgga
ggagcgtatcagtgctttgctcgaaatggcaagatgtccacccaagacttagtgcaggta
gtcttagaagatgggacgccaaagattctctctgccttcagtgagaaggtggtgagcccg
aatgagcccatctcactggtgtgtcacgtgaaaggaaccccactccccactgtcacctgg
accttggacgatgaccccgtcatcaaagacagcaaccaccgcatggatcgcatcatcacc
acagaaggtcacgtgctcagctacctgaatgtgtctcacacacaggtcactgatgggggt
gtctatcgctgcacctgcaacaactcagctggatcggtctcctaccaggctcgaataaac
gtaagaggtcctgccagtattcgaccaatgaaaaatgtcactgccatcgctgggagggac
acgtacattcactgtcgcatcattggttacccgtactactctattaagtggtataaggat
tccaatctgctcccgtttaaccaccgccaacgtgcctttgagaacaacggcacactgaag
ctgtccaatgtgcaaaactcagacgagggagagtacacgtgctacgtgttggtggatcca
gagaaacaaattcacaggagcgtccatgtgacagtgaaagtgccccctctgatccaacac
tcagactctcagagcgcttccattggtcagcgtgtctttatcccatgcgtggtcatatct
ggtgacctgccgatgtctataacctggcacaaagatggacgtccaatcaacgccagcctg
ggtgtcaccatcgacaacatagactttactagctcattacgcatttcaaacctgtcggaa
attcataacggcagttacacctgtatagcccgtaacgaggctgctgctgttgagcatagt
atacagctcatcgttaaagttccaccacattttgaggtacagccaagagaccaggatggc
atatatgggaaatcagtgatccttaattgttcagcaaagggaaacccaatccccactata
gtatggaaccactcaaaaggttctggcgtacctcagttccagcccatagccttgaattct
ggttcacgtatccagctcctggagaagggctctctgctcataaaacacgtcctggaggaa
gattctggattttatctgtgcaaggtcagcaatgacgtgggagcagatatcagcaagagc
atgtacctcaccgttaaaattcctgccatgatcacatcttaccccaacaccacacgagca
gaacagggtcacatgactgagatgagctgcactgctcacggtgaaaagcccatcaaggtt
cgctgggagaaggagtctcatatcatcaacccagacatgagccgctatgtggtcactgtg
aaggaagtgggagatgaggtcatatccaccctgcagatcttacacaccgtcagagaggac
tctggctttttctcttgcattgccatcaactcatatggcgaagataaaggaatcattcag
ctgattgtacaagatcgtcctgatcctcctgaagttgagatcagagaggtgaaggaccga
accattgcacttcgctggacaatgggctttgatggcaacacccctattacaggatatgac
atcaactataaaaacaaatcatcttcatgggcctcatctcaaatgaccaaagacgtctcc
cctcagctgaatcaggccaccatcattgaactccaccctgcttccacctacaacatccgc
atgtttgccaaaaaccagatcggtgaaagcaggccaagcaatgagctgaccatcaccaca
gatgaagcaccacctgatggcgctcctcaagatgtgcagctggaagcaatctcatcccaa
agcatcaaagtcacatggaagccccctcacaaacacttacagaatggtttaatccgaagc
taccaagtgtgttatcgggagtttgggacagggggcagcccacagtacaacaccatcaat
gtggacaccacaggggacactgaaaccctcactttggataatctgaagaagtacacccag
tatgaggtgcgggtgcaagcagccaatcgggcaggcatgggtcccaccacagaggaaatc
accatcaccacgctagaggacgtgcccagtcgtccacctgagaatgttgtgacaacagct
accacccccgaaaccatctccctgtcctggtctgctctgaccaaagaagccctcaacggc
atgctgcttggatatcgagtcatctattgggccaaccttcctgatggagagctgggagag
atcaggaacatcacaaccaccaagccttctctagagttggaacggctggagaaatacacc
aactacagtatccaggtcctggccttcactcgagccggagacggagtccgcagtgagcaa
atctacacacgcaccaaagaggacgttcctggtcctccggctggagttaaggcagctgct
tccacaagctcggtggtgtttgtttcctggcttcctccactcaaactcaacggaatcatc
cggaaatataccgtcttctgttccaacccttaccccacggtgatcagtgagtttgaggct
gcacctgatgtttattttcgccgtttgaccaacttgaatcagaactggcagtacagcatc
tgggttgtggcggtcactgcagctggccgtgggaataccagtgaaattatcaccgtagag
ccccaagctaaagcccctgcgcgaatcctgacgttcagtggaactgtaaccaccccctgg
atgagggacattgtccttccatgcaaagcagtcggagaccctcctcccaccgtcaagtgg
ctcaagggaaacaatggtactcctgctcctgtttcaatcgatggacgccgcagcgctcac
agcaatggcagctttgttattcgcactgtcaaagcagaggattctgggtactacagatgt
gttgccagcaacaactggggttcagatgagatcattctaaaccttcaggtccaagtacct
ccggaccaaccacgtctcacagtgaccaaaaccacgaccacctccatcacactgacctgg
atccctggagacaatggagggagttccatcagaggctacattctgcagtactctgaggat
aacagtgaagagtggggcagtttctccatcagccccagtgagcggtcttaccgtctagag
aagctaaagtgtggtacttggtacaaatttactcttacagcacaaaatgcagttggtcct
ggacgcatcagtgaaatcattgaggctaaaacccatgggaaagagccacaattcgccaaa
gatcatgagcttttctcaagtatcaactctacccgtgtggagctcaacctcattggttgg
aacaatggcggctgttcgattgactccttcacactggaatatcgaccggtggacaccacc
aaatggaccatggtgaagcgagattctctcaccaaaaaccacattctctacgacctacag
gaagccacctggtacgagctccagatgagagtgggcaacagtgcaggaacagcagagaag
aaggttctgttcgccactctaaatgtgaatggcagcacaatcgctccattgccgaagact
gtggtccccagccagaagaacaggcagggcaatgagggactcaagatgatggtcacaatc
atctgtattctggtggcaatttccatgggcttcattgttcttctggtattgaggaggaga
agaagagagcaaaggctcaagagattacgagatgcaaagagcctagcagagatgctaatg
agtaaaaatgcacgtacaccagacactgtgaacaaacagcagcagactctgaggatgcac
atcgatatcccacgtgctcagctactcatcgaggagagagacaccatggagacaattgat
gaccgctccacagtgctgttgacagacaatgactttggagaaacatctaaacagaagtcc
tcaaccgtcacccatacagtgcattaccagtctctatctcaggccactggaccactagta
gacgtatctgacgctagacctggtacaaaccccactgcccgccgcacagctaaagcaggt
cccgccacacggagtcgatacgccagccagtggaccctgaaccgaccgcaccctcccgtc
tcctcacacaccctcagtactgactggaggctgcccacaccccgtgccactggttcagtg
gacaaagagagtgacagttacagtgtcagtccctctcaggacacagaccgtgctcgcagc
agtatggtgtctacagaaagtgcctcctccacgtatgaggagttagcacgtgcctacgaa
catgcgaagatggaggaacatctgcgacatgctaagttcacaatcacagaatgcttcatc
tcagacacatcctctgaacagatgacagccggcaccaatgactacacagacagcctgacg
tccagcacgccgtcagaatcaggcatctgcagattcaccgcctccccacccaaaccacag
gatgccagccgggtcatgaacatggccgtgccgaaagcacacagacccggaggtgaactg
gtccatcttcccccttacctacgcatggacttccttttgaaccggggagcagcctcttca
gggcgagaggccacaggacagacttgtatggacccgcagaagagccgaatggcgaaacgg
ccagcattgctggcgcccacaccctccgagaccccctcgtcagccctctcttcctccggc
ccccccagcagagaggcagtacaacagtggcagccgggaactgcctccacactgccacag
cgcgagccgggcgacctggcccaggccgccaaactcagcagctcccaggaatcgctgcta
gactccagaggacacctgaaacagagcaacaacccctacgcaaagtcctacacacttgta
taa
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