Carassius gibelio (silver crucian carp): 128029598
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Entry
128029598 CDS
T08819
Name
(RefSeq) tiggy-winkle hedgehog protein-like isoform X1
KO
K11988
sonic hedgehog
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128029598
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
128029598
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
128029598
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C46: hedgehog family
128029598
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Heparan sulfate / Heparin
Morphogens
128029598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF7764
Ribosomal_S6e
Hom_end_hint
PT-HINT
Vint
Motif
Other DBs
NCBI-GeneID:
128029598
NCBI-ProteinID:
XP_052473359
LinkDB
All DBs
Position
A2:complement(18911168..18915659)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKQIVFLCFISLLLTSCGLACGPGRGYGKRRQPKKLTPLAYKQYIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTATLADGRRKHIKDLKVGDRVLAADEEGNVILSD
FIMFMDHDPTTRRQFIVIETSEPFTKLTLTAAHLVFIGNASASSGMTVTFASDVKPGDTV
LVTEGTSKTLKSVTVNRSYTEELKGSYAPVTAHGTIIVDQVLASCYAVIDSHKWAHWAFA
PVRLSHKLTTWLFPARDINVTFQEDGIHWYSEMLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaaattgtttttctgtgttttattagcctccttctg
acgtcttgtggattagcttgtggtcctggtagaggttatggaaaacgaagacaaccaaag
aaattaaccccgttggcttacaagcaatatatacctaacgttgccgagaaaacgcttggg
gccagtggcaaatacgaaggcaaaatcacaaggaattcggagagatttaaagagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacaggctg
atgaccaagcggtgtaaggataagttaaattcgttggcgatatccgtcatgaaccagtgg
ccgggtgtcaaactgcgcgtcaccgagggctgggatgaggatggtcaccatttcgaagaa
tctttgcactacgagggacgggcggtggacataactacctcggacagagataaaagcaag
tatgggatgctatctaggcttgcagtggaggcaggattcgactgggtctattacgaatcc
aaagcccacatacactgctctgtcaaagcagaaaattcagtggctgctaaatcagggggg
tgctttcctggatctggcacggcgacactcgcagacgggaggaggaaacacatcaaagac
cttaaagtgggcgaccgggttttagcggctgacgaggagggaaatgtcatattaagcgac
ttcatcatgttcatggaccacgatccgacaacgagaaggcaattcatcgtcatcgaaacg
tcagagccatttacaaagctcaccctcacagccgcgcacctagtcttcattggaaacgcg
tctgctagttcgggtatgacagtgacatttgctagcgacgtgaagcctggagatacggtt
ttagtgacggaaggtacaagcaagaccctcaagagcgttacagtgaataggagttacact
gaagagctcaagggctcttacgcgccagtcaccgcgcacggaaccataatagtggatcag
gtgctggcttcgtgttacgcggttattgacagtcacaaatgggcacactgggcttttgca
ccggtccggttaagtcacaagctgacgacgtggctttttccggctcgtgatataaacgtc
acttttcaggaggacggcatccactggtactcagagatgctgtttcacatcggctcgtgg
ctgctggacagagactctttccatccactcgggatttcacacttaagttga
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