Carassius gibelio (silver crucian carp): 128029756
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Entry
128029756 CDS
T08819
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128029756
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128029756
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
DUF3447
Motif
Other DBs
NCBI-GeneID:
128029756
NCBI-ProteinID:
XP_052473372
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All DBs
Position
A2:complement(18944127..18952336)
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AA seq
1147 aa
AA seq
DB search
MTKESAEMTNISKAESKSRQQSFDSAMDGDESNQMSANVLEWTKQGNVVALEKHTRYLDI
RDNTGASPMHYAASMGHFRIIRLIVQITGQQELNARDEEGNTPLHWAVQKDQPGSCSLLL
TLGADPNILNNSQQSPLHMAVSMGKNFVLEQLVSHKQTDVNLEGDMGNTPVILAASLDNH
EALVILYKHGAKFCRQNKLGHFAIHAAAFAGAKKSMEVILLKGEEVGLSIDTHVNYVDKS
CSSPLHLAVRGGNLDIIKLCIAYGAKIDQQQCDKSTALHFACSQGAIEVVKVMLSAYHKV
CDLINITDGANQTPLHKAAIFDHFELSEYLISQGADIDFVDCKGHSPLLLATSCGAWRTV
NLLLSHGADLKKKDKSGCNFLHLAILQPRGLKNLPTEVLQHESVRELLNDEDTEGCTPLH
YACRLGIPESVKNMLGLEVSLDQKSKQKKSALHFAAEYGRINTCHRLLEMVTDTRLLNEG
DEKGLTPLHLASRGGHVKVVELLLRRGALFHSDYRGWSCLHHAASEGYTQTMDTLLTSNI
KLLNKTDGDGNTALHLAARAGHVATVRLLLYRGAKILLNKNDASFLHEAVHNGRKEVTNT
VIESDRCVEAMTTYKPNSSKRCIVMDMIEFLPDSFKHLLDSCIKESEEDVNSTNYYIEYN
FRWLQHPLQNLKKTGMKKDNTYKPLSALNVGTLQNLCYSCVSCEWPRSENVSPLQAMVNF
NRVSLLTHPVCKKYLEMKWNAYGIKAHLLNMTVYALGVFPLTYLIVNLKPTLVTARNVTS
VNMVCTSLYKQSYVITACMFLVLAMNMYAVGKEILQIIQQRVNYLQDLSNYMDWGAAICS
LVFVVPLLLNVKSSWHWQAGVLAALASWMNLLLYLQRFERIGIYVVMFREISRTLLSIIL
LFFYLILGFALAFYALMIEQQHFGRIFLSLLQTFVMMVGEINYQDNFLKPFLQGDLPFPL
LTLAIFVWFVLLVPILLMNLLIGLAVGDIAEVQTNACLKRIAMQIELHTNLEERLPYWFM
KRVDQVTVREFPNKCFSGKKRWFFCGNEVRKSRTRLSPTISQLTPLERELTKQKYRMREM
SDSMEKQHNLLKLIVQKMEISSEAEEHDGPPVFQELREKLLSRSKWGPLLRAVTARKKGV
CKFMKTS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaagtgcagaaatgacaaacatctccaaagctgagtcgaaatctagacaa
cagtcattcgatagtgcaatggatggagacgagagcaaccagatgtctgcaaatgtattg
gagtggactaagcaaggaaatgtagtcgctctggaaaagcacaccaggtacctggacata
cgagacaacaccggtgccagcccaatgcactacgctgcatccatgggacactttcgcatc
atcagactaatagtgcagatcactggacagcaagagctcaatgccagggatgaggagggg
aacacacctcttcattgggctgtgcagaaggaccagccaggaagctgctctctgcttctg
actctgggagcagatcctaacatcctaaacaacagccaacagtcaccgctacatatggca
gtcagcatgggtaaaaatttcgtgttagagcaacttgtctcgcataaacaaaccgatgtg
aacctggaaggtgacatgggaaacacgcctgtcattttagctgcttctttggacaaccat
gaggctctggtcatactgtacaaacatggtgccaagttctgccgtcagaacaagctaggt
cattttgcgattcatgctgctgcttttgctggagctaagaaatccatggaggtcattctt
ctgaaaggagaagaagttggtctgtctattgacacccatgtgaactatgtggataaatct
tgcagtagtccacttcacctggctgtacgtggaggaaatcttgacatcattaaactctgc
attgcatatggagcgaaaattgaccagcagcagtgtgataaatccactgctctccacttt
gcatgtagtcaaggcgccattgaggttgttaaagtcatgctctcggcttatcataaagtg
tgcgatcttatcaacatcactgatggggccaaccagacacctctacataaagcagccatt
tttgatcattttgaactctctgagtaccttatatcacagggtgctgacattgattttgtt
gactgcaaaggccattctccacttcttctggcaacaagttgcggagcatggagaactgtc
aatctgctcctctcccatggagctgatctgaagaaaaaagacaaatctggatgcaacttc
ttgcatctggccatcttgcagcccaggggtctgaaaaacctgcccacagaggtactgcag
cacgagagtgtgagagagcttctcaatgatgaggatactgagggctgtactcctctccat
tacgcctgcagactgggaataccagagtctgtgaagaacatgctggggttagaggtctcg
ctggatcagaagtccaaacagaagaaatctgcacttcattttgcggccgaatatgggagg
attaacacatgccacaggcttttggagatggtgactgacaccagactgctgaatgagggg
gatgagaaaggactgaccccactgcatctggcatctcgcggaggtcacgtgaaagtagtc
gagcttctcctacgcaggggggcgctgtttcacagtgactatagaggatggtcatgcctt
catcatgctgcatctgaaggatacacacagaccatggacactttgttgacatctaacatc
aaacttctaaacaagactgatggagatgggaacacagctttgcatctggctgctagagca
ggtcatgtggcaacagtaagactgctgttatacagaggggccaagatcctcctcaacaag
aatgatgcgtctttcttgcatgaggcagtacataacgggaggaaggaggtcaccaatact
gtgatcgagagtgacagatgtgtagaggcgatgacaacgtacaaaccaaactcatccaaa
cgttgcattgtcatggacatgattgagtttcttccagactcctttaaacatcttctagac
tcctgcataaaggaatcagaggaagatgttaacagcaccaattactacattgagtacaat
ttcaggtggcttcagcatccactgcaaaaccttaaaaagacaggcatgaaaaaagacaac
acctacaaacctctcagtgcactaaatgtgggtactttacaaaacctatgttatagctgt
gttagttgtgaatggccacgttcagaaaatgtgtctccgctacaggctatggtgaatttt
aaccgtgtcagtttgctgacacatccggtctgcaagaaatatttggagatgaaatggaat
gcctatgggatcaaagcacatctgctcaatatgacggtgtatgcgctgggggtgtttcct
ctaacgtatctcattgtgaacctgaagcccacactggtcactgcaagaaatgtcacatca
gtcaacatggtctgcacgtccctgtacaagcaatcctatgtaatcacagcatgtatgttc
ctggttcttgcaatgaatatgtatgcagttgggaaagagatcctgcaaataattcaacag
cgggtgaattatttgcaggatctgtctaactacatggactggggcgctgcgatctgttct
ctggtgtttgtggtgccgctgctgctgaacgtgaagagttcctggcactggcaggctgga
gtactggcagctctggcctcctggatgaatctcctcctctatctccagcggtttgaacgg
atcggtatttatgtggtaatgtttcgggagatctcacggacgctcctgagcattattttg
ctgttcttttacttgatattgggatttgcattggccttctatgccttgatgatcgaacag
caacatttcgggaggattttcctgtcactgctgcagaccttcgtcatgatggtgggagaa
atcaactaccaggacaatttcttgaaacccttcctgcaaggagaccttcctttccccctt
ttgacattggcaatcttcgtttggtttgtcttacttgtgcccattcttctcatgaacctt
ctgattggtttggctgtcggtgacatagcagaggttcagacaaatgcatgtttgaagagg
attgcaatgcagattgaacttcacactaatctagaagagaggcttccctattggtttatg
aaacgggtggaccaggtcaccgtcagagaattcccaaacaaatgcttcagtggaaagaaa
agatggtttttctgtgggaatgaggtgaggaagtccaggacccgtctcagtcctacaatc
tcccagttaactccactggaacgggagctaaccaaacagaaatacaggatgagggagatg
tcagattccatggaaaagcaacacaacctgctaaagcttatagtgcagaagatggagatc
agctctgaggcagaggaacatgacggacccccagtctttcaagaactgagagagaaactc
ctcagtaggagcaaatggggtccactgctcagggcagtgaccgccagaaagaagggagtc
tgcaaattcatgaaaacgtcatga
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