Carassius gibelio (silver crucian carp): 128030082
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Entry
128030082 CDS
T08819
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128030082
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128030082
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128030082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
128030082
NCBI-ProteinID:
XP_052473526
LinkDB
All DBs
Position
A16:complement(21949285..22154835)
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AA seq
2207 aa
AA seq
DB search
MSPPRLTGALRSFSSVSKQDDLTQDIYDLKSKRLKRQEIFARDGLTWQKIVQFFTQHLEK
KDQPAATHELKNILQAAKQIVGTDHGQDTIESAGVFLFKTFYNKDQIGHEETRAIKQMFG
PFPASAAEMSCAAVGRLVAQIGESQVDAFIQTQSSLKTVNRSSIFGRNIAFSFDTYVLDA
QDPLPWSEGTDTEQDMDFHSFLNNHVGERKAVGDRDDAYSAEDLERRNADSSILRQEVEK
YLNEGNMVSSSAEELATSLFEMLASTRSDDELQNELFEFLGPQGFEMISKLLQSRSDIVD
SLVSVPLDSRPHFPSGMLKGMRDESAKPTYGCQVTIQSEQEKHMMKIYRKEEKKERKREK
RGDEGDTCENTFHFDPKELRLQREQALLTARRSPVLGRHREYERIRYPNVYDSHAEAIKT
SAFVGGAKMLLPEGIKRENNKMYEEVEIPPNEPMPIGFEEKPVLISELDEIGQLVFKGMK
RLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIV
YVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRK
SVGDVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNY
LDVASFLHVNPCIGLFYFDGRFRPVPLGQSFVGVKTTNKVQQLHDMEEVCYEKVLKQIRA
GHQVMVFVHARNSTVRTGMSLIEMAKNRGELSFFQVDHGPDYGQCEKQVQRSRNKQMREM
FPDGFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTNIYDAK
RGALVDLGILDVMQIFGRAGRPQFDKYGEGAIITTHDKLSHYLTLLTQQNPIESQFQQSL
ADNLNAEIALGTVTNVDEAVRWLSYTYLYVRMRANPLAYGISHKAYQMDPQLELYRKELV
VESGRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIETFNELFNAQKTEADILSI
VSKAEEFEQVKVRDEELEELEKLLCNFCELPAAGGVENGYGKINILLQTYIGRGEVDSFS
LISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFGALP
PSVLSRMEERNLTVDKLKEMGKDEIGHMLHHVNIGLKVKQCVHQIPAILMESSIQPITRT
VLRVRLSITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLHKKQVVSGEPQQVV
FTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALG
NREYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPTSK
VVYIAPLKALVRERIEDWKVRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGV
SRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKQVRVVGLSTALA
NARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRTHSP
AKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMDDIIGTIRESNLKLTLAF
GIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRR
YVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDH
LNAEIAAGTVTSKQDAMDYITWTYFFRRLVMNPSYYKLDDISHETINKYLSNLVERSLRD
LECSYCMEIQEDEQTIEPLTYGRISSYYYLKHQTIRMFKERLKPELPVQELLAVLSEAEE
YAELPVRHNEDQLNSQLAQQLPLQVNPHSYDSAHTKTHLLMQAHFSRAQLPCSDYGTDTK
TVLDNAIRICQAMLDVVANEGWLVSALSVCNLVQMIIQARWLHDSSLLTLPHIEKQDLYV
FRRWSAKGARGGGGYQGPIEGLPELMAACDGKEDKFTSMVKEVLQPNQIYQAWAFLSHLP
VVEVRMSVKGWWEGCEEQTERVIPANVTNIRDESSWVPLHADQEYVLQVSLRRLNAGQQR
RKQDSKAQAPRFPKPKDEGWFLVLGEVDKKELLAIKRVGFIRNHSSVSVAFYTPEKTGKC
IYTLYLMSDSYLGLDQQYDIHLNVIPASIAAQVNSEISDNVAKMARK
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcctcgactcactggagccctgcgctccttctcttctgtcagcaaacaggac
gatttaacacaagacatttatgatctaaagagcaagcgcctgaaacggcaggaaatattt
gcccgagacggcctgacatggcagaagatagttcagttcttcacccaacatctggagaag
aaagatcagccggcagccactcatgagttaaagaatatcctccaagcagccaaacagatc
gttggtacagatcatgggcaggacaccattgaaagtgcgggagtcttcttgtttaaaaca
ttctacaacaaagaccagatcggtcatgaggaaaccagggccatcaaacagatgtttgga
ccttttccggcctctgccgccgagatgtcttgtgcagctgtgggtcgtttagtggcccag
attggagaatctcaggtggatgctttcatccaaacacagagttctctcaagacggtgaac
cgtagttctatctttgggcggaacattgctttctcatttgacacatatgtgctggatgct
caggatcctctgccctggtcagaggggactgatacagagcaggacatggactttcacagc
ttcctcaataatcatgttggtgagaggaaggcggtgggtgatcgagatgatgcttactca
gcagaagacctggagcggagaaacgcagacagctccatccttagacaagaggtggagaaa
tacctgaacgagggaaatatggtatcgtccagtgccgaagagctcgccacttctcttttt
gagatgcttgcttccacaaggagtgatgacgaactacaaaatgagctgtttgagtttcta
ggtcctcaggggtttgagatgatctccaaactccttcagagtaggtcagacattgtggac
tcgctggtgtccgtccctttggatagcagacctcacttcccttcaggaatgcttaaaggg
atgagagatgaatccgccaagcccacatacggctgccaggtgaccatccagtccgagcag
gagaagcacatgatgaagatttacagaaaagaagagaagaaggagaggaaacgtgagaaa
agaggggatgaaggggatacctgtgaaaacacctttcattttgaccccaaagagctcaga
ctgcagagggagcaggccttgctgactgcacgccgttctccagtgttaggacggcacaga
gagtatgaacgcatccgttaccctaacgtttatgattctcatgccgaagccatcaagact
tcagcattcgtcggaggagccaagatgctgctgcctgagggtatcaaaagagagaataac
aagatgtacgaggaggttgagatcccccccaacgagcccatgcccattggctttgaggag
aaacccgtgctcatctcagagctggacgagattggccagttggtgttcaagggcatgaag
cggttaaacagaattcagtctatagtgttcgagaccgcctacaataccaatgaaaacctg
ctcatctgtgcccccaccggtgccggcaaaaccaacattgccatgctcaccgtcctacac
gagatccgccaacacctgcagcctgggggagtcatccgcaaggaccagtttaagattgta
tacgtggctccgatgaaggccctggctgctgagatgactaattacttcagtaagcgattg
gagcctctgggcatcgctgtcaaggagctgacgggagacatgcagctgaccaaaggagaa
atcctccgcactcagatgttggtgacgactccagagaagtgggatgtggtgacaaggaag
agtgtgggggacgtggctttgtctcagatcgtccgactgctcatcctggatgaagttcat
cttcttcatgaggatagagggcctgttctggagagcctggtggcccggacattgcgtcag
gtggagtcgacccagagcatgattcgaatacttggtctctcagcaactctgccgaattac
ttggatgtggcgtctttcttgcatgtgaacccttgcattggattgttctactttgacggt
cgtttccgtcctgttccacttggtcagagctttgttggtgtcaagactacaaataaggtc
cagcagctacatgacatggaggaggtttgttatgagaaggtcctgaagcagatcagagcg
ggtcaccaggtgatggtgtttgtacatgcccgtaactccaccgtccgcaccggcatgagt
ctgatcgagatggccaagaaccggggagagctgtcattctttcaggtcgaccatggtcca
gactacggccagtgtgagaaacaggtgcagcgctccagaaacaagcagatgagggagatg
tttcccgacggcttcggcatccatcatgcgggaatgttacggcaggaccgcacgctcatg
gagaacatgttttcaagaggatacctgaaggttctggtgtgcaccgccacgctggcctgg
ggtgttaacttacccgctcacgcggtcatcattaagggcactaatatctatgatgccaag
cgtggtgcattagtggatctgggcatcctggatgtgatgcagatcttcgggcgcgccgga
cggccacagtttgataagtacggtgaaggagccatcatcacgacccatgacaagctgagc
cattacctgacgctcctgactcagcagaaccccatcgagagccagttccagcagagtctc
gccgacaacctcaacgccgagatcgctctagggacggtgactaatgttgatgaagctgtg
cgctggctgagttacacgtacctgtatgtgcgaatgagagccaatccactggcttacggg
atcagtcacaaggcctatcagatggatccacagctggagctgtaccggaaggagttagtc
gtggagtccggcaggaagctggataaggcacgcatgatccgctttgatgagagaactggt
tattttgcatccacagaccttggcaggacggccagtcacttctacataaagtacaacacc
atcgagacattcaatgagcttttcaatgcgcagaagactgaagctgatattctgagcatt
gtttcaaaagctgaagaatttgagcaggtcaaggtccgggacgaggagctggaggagctg
gagaagctgttgtgtaatttctgtgagctgccggcggccggaggagtggagaacggctac
ggcaagataaacatccttctgcagacgtacatcggccgcggggaggtggacagcttctcc
ctcatatcggacctgtcttatgtagcgcagaatgctgctcgtatcgtgcgggctctgttt
gagatcgctctgaggaagcgctggccggccatgacctaccgcctgctgaacctgtgtaaa
gtgattgacaagcgtctgtggggctgggcccacccgctgcgacagttcggcgctctgccc
ccatcagtgctgtccagaatggaggagaggaacctcacggtagacaaactcaaagaaatg
ggcaaagatgagattggtcacatgttgcatcacgtgaacatcggactgaaggtgaagcag
tgtgttcatcagatacccgccatcctgatggagtccagcattcagccaatcacacgcact
gtcctgcgcgtccgcctcagcatcaccccagacttcaggtggaatgaccaggtccatggc
tcagtgggagagccctggtggttatgggtagaggatccgatcaacgaccacatctaccac
tcggagtacttccttctgcataagaaacaggttgtgagtggagagccccagcaggtggtc
ttcactatacccatcttcgagcccatgccttctcagtattacatccgagccgtgtctgac
cgctggctgggctctgaagctgtgtgcatcatcaacttccagcatctcatcctgcctgaa
agacacccgccacacacagagctcttggatcttcagccgctgcctgtgactgcattggga
aaccgggagtatgagagtctgtacaagttcacgcactttaatcccattcagacgcagatc
ttccatacactctaccacacagacaccaacgtcctgctgggggcccccactggctccggc
aaaaccatcgctgcagagatggccatgttcagggtcttcaacaagtacccaacctccaag
gtggtctacattgctcctctcaaagctctggtccgagagaggattgaggactggaaggtc
agaatagaagagaaacttgggagaaaggtggttgagttaacaggtgacgttactccagac
atgcgagctattgcgcaggctgacctgatcgtcaccactccagagaaatgggatggagtc
agccgcagctggcagaaccgcagctatgtgcagaaagtggctattctcatcatagacgag
atccatcttctaggtgaggacagagggccggttctagaggtcattgtgtccagaaccaac
tttatctcatcccacacatcgaaacaagtgcgagtagtgggactctcgaccgcgctggct
aatgcacgggatctcgccgactggctgggcatcggacaggtgggactgtttaatttccgg
ccctctgttcgcccagtgccgctggaggttcacatccagggctttccggggcagcattat
tgccctcgcatggccagcatgaacaaaccagtcttccaagccatccgcacacattctcct
gctaaaccggtcctcatatttgtgtcttcgcgccgccagacacggctcacggctctggac
ctcattgcgtttctggctacagaagacgaccccaaacagtggctccaccaggacgagaga
gagatggacgatatcatcggcactataagagagtcgaacctgaagctgaccctagcgttt
gggatcgggatgcatcatgctggacttcacgagcgagacaggaagacggtggaggagctg
ttcgtcaactgtaagatccaggtgttaattgcaactagcacactagcgtggggcgtcaac
ttccctgctcacctggtgatcgtgaagggcacagaatactatgacggaaagacccgccgc
tacgtggattaccctataacagatgttcttcagatgatgggtcgagcagggcgaccgcag
ttcgatgaccagggcaaggctgtcatccttgtgcacgacatcaagaaggacttctataag
aagttcttgtacgagccgttccccgtggagtctagtcttctgagcgtgctctcggaccac
ttgaatgcagaaatcgcagcaggcacagtcacctcaaaacaagacgccatggattacatc
acctggacgtacttcttccgcaggctggtcatgaaccccagttactataaattggatgac
atcagccatgaaaccattaacaaatacctttcaaacctggtggagaggagtctgagggat
ctggagtgttcctactgcatggaaatacaggaggacgagcaaaccatcgagccgctgacg
tatggccgcatctcatcctactattacctgaaacaccagaccatccgcatgttcaaagag
cgtctgaagccggagctgcccgtccaagagctgctggccgtcctgtcggaagcagaagag
tacgccgagctccccgtacgccacaacgaggaccaactgaacagtcagctggcgcagcag
ctccccctgcaggtcaaccctcactcgtatgacagcgcacacaccaaaacacacctgctc
atgcaggcccacttcagccgggcacagctgccctgcagcgactacgggaccgacaccaag
accgtgctggacaacgccatccgcatctgccaggctatgctggatgtggtggccaatgaa
ggctggctcgtgtctgcgctgagcgtttgtaaccttgtacagatgatcattcaggccaga
tggcttcacgattcctccctgctcacactccctcacatcgagaagcaggatctctatgtc
ttcaggaggtggagcgccaaaggtgcgaggggcggaggtggctatcaaggcccaatcgag
gggcttcccgagctaatggctgcctgcgacgggaaagaggacaagttcacatcgatggtg
aaggaggtgctgcagcccaatcagatctatcaggcgtgggcttttctgagtcacctgcct
gtggtggaggtcaggatgagtgttaagggctggtgggagggttgtgaggagcaaacagag
cgtgtgatccctgctaacgtcaccaacatcagggacgagtccagctgggtgccgctgcac
gctgaccaggagtacgtcctccaggtgtccctgcgccgcctcaacgccggccagcaaaga
aggaagcaggacagcaaggcgcaggctccacgcttccccaaacccaaagacgaaggctgg
tttcttgttctcggggaggttgacaagaaagaactgctggctatcaaacgtgtgggattc
atacgcaaccacagcagcgtgtccgtggccttctatacacctgagaagacgggaaagtgt
atctacacgctgtacctgatgagcgacagctacctcggcctggaccagcagtacgacatc
cacctgaacgtcatcccagccagcatcgctgcgcaagtcaacagtgagatatcagataac
gttgccaaaatggcccggaagtga
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integrated database retrieval system
