Carassius gibelio (silver crucian carp): 128030116
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Entry
128030116 CDS
T08819
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128030116
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128030116
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Astro_capsid_p
MRP-S32
Motif
Other DBs
NCBI-GeneID:
128030116
NCBI-ProteinID:
XP_052473575
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Position
A16:complement(26120574..26124754)
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AA seq
430 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHASPAFYPYGQFQYGDPSRPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GRSKEDEDANIFGSDNEGDAEKNEDDEEIDLESIDIDKIDENDGDQSNEEDEEKRGELER
LHAHEAFEKSKPNTISGSKEPSDGNNNNTSVLSPGRQGGFPVPVSNKPKIWSLAETATSP
DSLQKPTSPSVPATHPAFLPSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVSHQHN
HPVQQQHSSGAAVNSDRAPEDLSPKHIDRENVLRNESPTQPLKSSFRPLHDSPRNQQEST
QRVLTALSSA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggttacccgcagtatttaagtgcctcccaggcggtgtacgga
ggcgatcggccgggagtgctgactccgtcgtcccgcggagggagcgcagagatcggggga
agcgcgtcggcggccgccgctgccgtgtcctcggtgctgggcatgtacccctacgcacac
aactacagcgcctttctgccttacaccagcgccgatctggctcttttctcccagatgggc
tctcagtacgacttaaaagacagtcccggagtgcaccccgcgagcttcgctgcccacgcg
agcccggccttctacccctacggtcagttccagtacggagacccgtccaggcccaagaac
gccacgcgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaagaacccc
taccccaccaaaggagagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtgtccacctggttcgccaacgccagaagaagactcaagaaggagaacaaggtgacatgg
ggcagaagtaaagaggacgaagacgccaatatttttgggagcgacaacgagggggacgcc
gagaagaacgaagacgacgaggaaatagatctggagagcatagatatcgacaagatcgac
gaaaacgacggagatcagagcaacgaggaggacgaggaaaagcgcggggagctcgagaga
cttcacgctcacgaggccttcgagaaatccaaacccaacaccatttccggcagcaaagag
ccgtcggacggaaacaacaacaacacaagcgttctgtcgccgggtcgccagggaggtttt
ccagttcccgttagcaataaacccaaaatatggtcgttagcagaaaccgcgaccagtccc
gatagcttgcagaaacctacgtcaccctcggttcccgccactcacccggccttcctgccg
agccacggactgtacacgtgccagatcgggaagttccacaactggaccaatggcgcgttt
ctgggccagaactccctgctgaacgtgcgatcgttcctgggcgtcagtcatcagcacaat
cacccggttcagcagcagcactcatccggggcagccgtgaacagtgacagggcgccagag
gacctgagtccaaaacacatagatcgggaaaatgtcctcagaaatgaatcaccaacgcaa
cctttaaagtcatcctttcgtcctcttcacgacagccccagaaaccagcaggaatcgaca
cagagggtcctcacagctctctcttccgcttga
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