Carassius gibelio (silver crucian carp): 128030273
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Entry
128030273 CDS
T08819
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128030273
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128030273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
PPR
DUF2464
SPA
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
128030273
NCBI-ProteinID:
XP_052473713
LinkDB
All DBs
Position
A16:684432..711451
Genome browser
AA seq
1471 aa
AA seq
DB search
MTEERCPQLVDYFVVAGLAGAGSPLDEEGHQRGVRALQPVIDLAVIARGLGEDVPEGFTC
IEKTQGGHPAELSAGLLNNTHMFLCYRRGHDKPPLVELGVLYEGKDPVKPGWQVIETTPY
SRSANLSSGGPTMHRTFLMFRRAPDSQALNTLGVTEISLLMPSKGETAPHTYCRVDKDLN
TGMWGSALYLCYKRSVVKANALLYEAGLISRYPEEDLESFPLPDSVPVFCLPMGVTVESW
PLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYEAYARESLSERQCVRLGLLSVVDRRPIT
NRSVQVKKSICVLSHWPFFSVFQKFLTFIYRYSISGPHVLPLEKHISSFMHNVPFPSAQR
PRILVQLSPYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACLLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMPFPLRWHCPYIPLCPLRMADVLCAPMPFIVGVHSSYFDLYDPPTD
VVCVDLDTNTIFQSEDKKPLSWKSLPRKHGKILLSSLSNLHKTLEKIYTPGQEEATLEFL
LTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRSFLLPITQAPSDRTTDCSSLFNLQGF
LKSRDRAQQKFYTQLTRTQMFTQFIEECSFVSDRHGCLEFFDECVQKVDVEKPEDVRLID
RDECHSGEHTVFIMPPEEPQEADGSECPAPYSYDTFPVLQVDLFDRPQDQLQTPAKGSAP
SSPAPRRTKQEIKLAQKKAQKYSTVPEMWSKCLLGHCYGLWFICLPTFVRAESNKVRALQ
AAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKRAGITPNTITYGYY
NKAVLESKWPSTNQGGRLRWAKLRNVVLAVAQFRQPIKQQKRSTSFSSHTGDELSKPRPH
SAVLRKSSWSGLSDSSSHESLTSLAKSNSVSGVQASAGKMKLSKQTAAASSKPPAGRRDT
LSPPEPVLVRRSDVCLSTFHRDCAESTDTDCRGQPQRDSRSVEVRETLNRKSVDENYNNV
SSPSRSLTGKLQQLLTPTRNRASVRRAASMDDRRPGANGHLRHTSDQKPSRKSQMTESLL
KAKDRLYNATSESSLSVGSDIDMLDTQTLAVPLRKSWDSSQEVAGIEVLMSSCSLCRSCN
SLVYDEEIMAGWTSDDSNLNTTCPFCSAPFVPLLNAEICDPGPVCSVERSNLSTEDDLEN
IMRPRSAPGDTLQLQCNGVRETDTSSETSSQSEGSVPSVGGAPQVTVAYLSPLVVRKEME
SLLENEGEAVLSQVQLLDSHSILFWNLVWYFTRLGLPSNLLQLLRTSPLTARLTQGSEGT
AVRVRLLWDTLTPDTEQWPALYMLWRIHSGVPMRSYSWRHHNHPFNLTFLEEVLRWIGMN
EVHKAITLFLDTVAKQHGTPRIQRSLYREMLFLTVAAMGKDHVASFDKRYKAAYVRLSSS
LGREELRRKRVQPPSPKAVDCRRCFLLPLEC
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagcgatgtcctcagctggtggattatttcgtggtggcgggtctggcgggc
gctgggtctccgctggacgaggagggtcaccagaggggcgtgagagcgctgcagcccgtc
attgatctggccgtgatcgcccgtggtctcggggaggacgttcccgagggattcacctgc
atcgagaaaacacaaggaggccatccggcggagctgagcgcaggcctgctcaacaacaca
cacatgttcctgtgctaccgccgaggacacgacaaaccgcccctcgtggagctcggtgtt
ctgtacgagggcaaggatccggtcaagccggggtggcaggtgatcgagacgactccatac
agtcgctctgcgaacctcagctccggcggccccacaatgcaccgcactttcctgatgttt
cgccgagcgccggactcacaggcgctgaacacgctgggcgtcaccgagatctcactgctg
atgcctagcaagggcgagacggcgccacacacctactgcagagtggacaaggacctcaac
accggcatgtggggctcggcgctgtatctctgctacaagcgttcagtggttaaagcaaac
gctctgttgtacgaggcaggtctgatcagtcgctatccggaggaggatctggagtcgttc
ccgctgccggactctgttccggtcttctgtctgccgatgggagtgacggtggagagctgg
ccgctcaacactaaataccagctgcccgtcttctccaccttcgtcctgaccagcgcctcc
ggagacaaggtgtacggcgctgcgatccagttctacgaggcgtacgcccgcgagtctctg
tcggagcgtcagtgtgtgcgtctgggtctgctgagcgtcgtggaccgccggcccatcact
aaccgcagcgttcaggtcaagaagagcatctgcgtcctctcacactggcccttcttcagc
gtcttccagaagttcctcaccttcatctacagatactccatctctggaccacacgtgctg
ccgctggagaagcacatctcgagcttcatgcacaacgtcccgttcccgtcggcgcagcgt
cctcggatcctggtgcagctctctccgtatgataatctgctgctctgtcagcccgtgtcg
tctccgctgccgctcagtggggccagttttgtgaagctgctgcagaatctgggaccggag
aacgcgtgtctgctgctgctggcggttctgaccgaacacaagctgctgctgcactcgctg
cggcccgatgtcctgacgtccgtgagtgaggcgctcgtctccatgccatttcctctgcgc
tggcactgtccgtatatcccgctgtgtccgctgcggatggcagatgtgttgtgtgctccc
atgcccttcatcgtgggcgtccactccagctacttcgacctgtacgacccgccgactgac
gtggtgtgtgtggacctggacaccaacaccatcttccagtctgaagataagaagcctctg
tcctggaaatctttgcccaggaaacatgggaagatcctgctgagctctctgtccaacctg
cacaaaactctggagaagatctatactccgggtcaggaggaggctacgctggagttcctg
ctgacggactacgatctgatctacggccgtcagaagcagctggagctggagatccaggag
gccttcctgcgcttcatgagctgtctgctgagaggataccgctccttcctgctgcccatc
acacaagcgccctccgaccgaaccacggactgcagctcgctcttcaacctgcagggcttc
ctgaagtctcgtgatcgagcgcagcagaagttttacacgcagctcacgaggacgcagatg
ttcacgcagttcatcgaggagtgttcgttcgtcagcgaccgtcacggctgcctcgagttc
ttcgatgagtgcgtgcagaaggtggacgtggagaagccggaggacgtgcgtctgatcgac
cgagacgagtgtcacagcggtgagcacacggtgttcatcatgcctccggaggagccacag
gaagctgacggctccgagtgtcccgccccctacagctatgacacgttcccggtcctccag
gtggatctgttcgatcggccgcaggatcagctgcagactcctgctaaaggaagtgccccc
agtagccccgccccccgccgcactaaacaggagatcaagctggcgcagaagaaggcgcag
aagtactcgacggtgccggagatgtggtctaaatgtctgctgggtcactgctacggactc
tggttcatctgcttaccaacattcgtcagagcagagagcaataaagtccgagcgttgcag
gccgcatacgaggtgctcaaacacatggagacacgcaaggtggtgctgccggacgaggtg
tgttaccgtatcctcatgcagctgtgtggtcagtacggtcagccggttctggcggtcaga
gttctgctggagatgaagcgggcaggaataacgcccaacaccatcacatacggatactac
aataaagcggtgctagagagtaaatggccatccaccaatcaaggagggcgtcttcgctgg
gcgaagcttcgtaacgtggtattggccgtggctcagttcaggcagccaatcaaacagcag
aagaggagcacttcattcagcagccacacaggagacgagctgtctaagccccgcccccac
tcggcggtgctccgtaagtccagctggagcgggttgagtgacagctcgagccacgagtcg
ctgacgagtctggccaagagcaacagtgtgagcggcgttcaggcgtcagcaggcaagatg
aagctgtcaaagcagacggctgcggcctcaagcaagcctcctgccggccggcgtgacaca
ctgagtcctccagagccggtgttagtgcgccgcagcgacgtctgtctgtccaccttccac
agagactgtgcagagagcacagacacagactgcagaggtcagccgcagagggacagcagg
tcggtggaagtgagggagactctgaacaggaagtcggtggatgaaaactacaacaacgtt
tcctctccgagccgcagtctgaccgggaaactgcagcagctgctgacgcccacgaggaac
cgtgcctcggtgcgacgggccgctagcatggatgaccggcggccgggagcaaacggacac
ctgcgccacacatcagaccagaaaccgtcccgcaagagccagatgaccgagagtctgctg
aaggccaaggatcggctgtacaacgccacgtctgagagctctctgtctgtagggagtgac
attgacatgttggacacacagacgctggcagttcctctcaggaagtcgtgggattcatca
caggaagtggcaggcattgaggtgctgatgtcgagctgctcgctgtgccgcagctgtaat
tctctggtgtatgatgaggagatcatggcgggctggacgtctgacgactccaatctcaac
accacctgtccattctgctccgctccgttcgtcccgctgctgaacgctgagatctgtgac
ccggggcccgtctgcagtgtggagcgcagtaacctgagcacggaggatgatctggagaat
atcatgcgtcctcgctccgctccgggcgacacactgcagctccagtgtaacggcgtgaga
gagacggacaccagctccgagaccagcagccaatcagagggcagtgtgccatcagtaggc
ggagccccgcaggtgacggtggcatacctgagcccactggtagtgcgcaaggagatggag
agtctgctggagaacgagggcgaggctgttctctctcaggtccagctactggacagtcac
tccatcctcttctggaatctggtttggtacttcactcgcctcggcctgcccagtaacctg
ctgcagctgctgcggacgtctccgctgaccgcacgcctcacacaggggtcagagggcacg
gcggtgcgggtgaggctgctgtgggacacactgaccccagatacagagcagtggccggca
ctctacatgctctggaggattcacagtggcgtccccatgcgcagctacagctggcggcat
cacaaccatcccttcaacctcactttcctggaggaagtgcttcgctggatcggcatgaac
gaggtacacaaggccatcacactcttcctggatacggttgctaagcagcatggcactccg
cggatacagaggagtctgtacagagagatgctcttcctcacggtggccgccatgggcaaa
gatcacgtcgcttcctttgataagcgttataaagcggcatatgtgcgcttgagcagttct
ctgggccgagaagagctgaggaggaagagagtccagccgcccagtcctaaagcggtcgac
tgcagacgctgcttcctgctgccactggagtgctga
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