Carassius gibelio (silver crucian carp): 128030293
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Entry
128030293 CDS
T08819
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04621
NOD-like receptor signaling pathway
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128030293
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128030293
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
128030293
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128030293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
NOD2_WH
LRR_4
AAA_16
AAA_18
AAA_22
NTPase_1
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
128030293
NCBI-ProteinID:
XP_052473745
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All DBs
Position
A16:complement(1230494..1237984)
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AA seq
937 aa
AA seq
DB search
MGSYKSEGSHLKLLTSHRELLVERVKNTQCILDNLQMNGFICTEDIEIIHRSSTRTDQVR
KILELVQSKGEECSAYFVHVLHEAYDAYIDLRPWFEEIQYTPLDTISVLPVVNTDPISKY
CEKLRYELGRDTQFITSYSKSEETPLEDLYTDTQMELLNDRGESLGYLQSLDELLGDQGV
FNPHAETIFITGDAGVGKSIVLQKLQNLWSRRQLKTHAKFFFKFRCRMFSAFKETDEISL
KDLIFKHNCYPDGDVDNEVFTYILRFPETVLFTFDGYDEIQTDFDLDNVPETVSPEEKTR
PLLLLMNLLCGKLLKGSRKILTARSGTEIQSRVIWKKVYLKGFSPEHLKRYTALHFPEKE
HRSMVTDQLDANPHLCGLCSVPLFSWIILKSFKHLHSVYDNFELPDSCITLTNVFLLLSE
VFLGHSTARPGLLKGSTRCPAETFKAGERKLAAFARLALNGLQRGGLVFSMEEVTSCGLE
DEVLQFGFLRPASHYDGCGGSATFEFLHETLQAFLAAFALVLDSKITPESILSFFSKCEY
KRSSHFSCLPCLGKSRPRDKDPFQTNFQFTNLFLCGLLSKPNAALLEHLVPPASLKQKRK
MLKSYLSNSVRTHLKGLPRYPSTDIDGDKVHAMPNFLWMLRCIFETNSEDIAKMTANGIS
ADYIKIAFCNIYSADCSALNFVLHHRRKHLGVDMDNNNINDYGVKQLRPSFSKMTVIRFC
VNQLTDSSIEVLAEELIRHKVIKVLGLYKNYITDVGAKLVAKIIEECPHLKVVKLGCNNI
TGVGGKYLASAIHKSKSIFDVGMWGNTIGDEGAEAFAEALKNHPSLTNLSLSANGITSHG
GRSLAKALKENKSLHIFWLIQNKISDDAASDFADAFRSNSALTHLMLIENEFTIHGAKEM
SEGLTNNTTLKEVNIKGSRVSEEEERLYEGDKRLRFH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttacaagagtgagggctctcacctgaagctgctgacttcacacagagagctg
ctggtggagcgggtgaagaacacgcaatgcattctggacaatctccagatgaacggcttc
atctgcaccgaagacatcgagatcattcaccgcagcagcaccagaactgaccaggttcgc
aagatcttggagctggttcagagtaaaggagaggagtgctctgcgtatttcgtacacgtt
cttcatgaagcctacgacgcttacattgatctgcggccttggtttgaagaaattcagtac
acgccattagacaccattagtgtcctaccagtggtgaacacagacccgattagcaagtac
tgcgagaagctccgatatgagctgggaagagacactcagttcatcacgtcgtactcgaag
agcgaggagacgccgctggaggatctttacacggacactcagatggagctcctgaacgat
agaggcgagagtttaggatacttacagagtctggacgagcttttgggagaccagggagtc
ttcaatccgcacgccgagacaatcttcatcaccggcgacgctggcgtaggcaaatccatc
gttcttcagaaactccagaatctgtggtccagaaggcagctgaaaacccacgccaagttc
ttcttcaagttccgatgcaggatgttcagcgcctttaaggagaccgacgagatctcgctg
aaggatctgatctttaaacacaactgctatccggacggcgacgtcgataacgaggtcttc
acctacatcttgcggttcccggagacggtgctcttcacctttgacggctacgatgaaatc
caaacggatttcgatttggacaacgtgccggaaacggtttccccggaggagaagacccgt
ccacttttgcttctcatgaatctgctttgcggaaagttgctcaaaggttcccggaagatt
ctcactgcacgaagtggcaccgagatccaaagcagagtgatctggaagaaagtctatttg
aagggattctcccctgaacacctgaagaggtacacagctttgcatttcccagagaaggaa
caccggtcaatggtgaccgatcaactggacgccaaccctcatctctgcggtctttgctcc
gtcccgttgttcagctggatcatcctcaagagcttcaagcatctccattcggtgtatgac
aactttgagttgccggattcttgcattacgctcacaaacgtcttcttgcttctttccgag
gtctttcttggacactcgactgcacgtcctggtcttttaaaagggagcacgcggtgtcct
gcggagacttttaaagctggagagcgtaagcttgcggccttcgctcgactggcgttgaac
ggtctccaacgaggaggactcgtgttcagcatggaggaagtgacatcctgtggattagaa
gatgaagtccttcagtttgggtttctgaggcctgcttctcattacgatggatgcggaggc
tcggcaaccttcgagtttctccacgagaccctccaggccttcctagcggcgtttgcattg
gtgctggactccaaaatcactccggagtccattctaagtttcttctccaaatgcgaatac
aagaggtcgtcgcatttctcctgcttgccttgcttgggaaagtcgagacctagagataaa
gacccttttcaaaccaacttccagttcaccaatttattcttgtgtggcctcttgtccaaa
cccaacgccgcactcctggagcatctcgttcctccggcgtcattgaaacagaagcgcaag
atgctcaagtcgtatctgtccaacagcgtgaggacgcatcttaaaggccttcctcgatat
ccatccacagacattgatggcgacaaggtgcatgcaatgccgaacttcttgtggatgctg
cggtgcatatttgagacgaacagcgaggacattgcaaagatgacggccaacggcatatcg
gcggattacattaagatcgccttctgtaacatttactcggccgactgcagtgcgttgaac
tttgtcctccaccaccgtaggaaacacctgggggtcgacatggacaataacaacatcaac
gattacggcgtgaagcaactgagaccctccttcagcaaaatgaccgtaatacgattttgc
gtgaatcagctgacggacagcagtattgaggttctggcagaggaacttatcagacacaaa
gtcattaaggtcttggggctttacaaaaactacatcacagatgttggagccaaactcgta
gcgaagatcattgaagaatgtccacacttgaaggtcgttaagcttggctgcaacaacatc
acaggtgtgggcgggaaatacctcgccagtgcaattcacaagagcaaatctatctttgat
gtaggaatgtggggaaacaccatcggtgacgagggcgcagaagcgtttgcagaggctttg
aagaatcacccaagcctcaccaatctcagtctctccgccaatggcataacgtctcacggt
ggaagaagtctggcaaaagcactgaaggaaaacaaaagccttcacatcttctggttgata
cagaataaaatctctgatgatgcagcgtcagactttgccgatgcctttagatccaactct
gctctgacgcatctgatgctaatagaaaacgagttcaccattcatggagccaaagagatg
tctgaaggcctgactaacaacactacactgaaggaagtcaacattaaaggaagccgggtt
tctgaagaagaagaacgactctatgagggcgacaagcggcttcgcttccactga
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