Carassius gibelio (silver crucian carp): 128030603
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Entry
128030603 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128030603
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128030603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128030603
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128030603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128030603
NCBI-ProteinID:
XP_052474319
LinkDB
All DBs
Position
A16:31376166..31388948
Genome browser
AA seq
1284 aa
AA seq
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MAARAESTPISLPELREGRSLLGDSSNSEVQIAETAADQNDVITQPELSSEQVNAKEARG
AESPGNEEQISESVLSSSVLNSSQLGDSPFYPGKTTYGGAAAMRSARSRPATPYQPPVRR
QIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDVSN
FQAKRKRLEPSVPPVQKLVVPAAAAVSGNRSVSFRPSLTPGGVNRGVEKNNRETPVRQSP
QISDHGQAPSPSTSSLSYPLSSTPAVSSAGSIGGKMKRDRAIRPSSKKPEDEFVEEPDLP
PASLPSSFTLPTLNFSSPTPTSSLPSKPFATASEEPAANKEPAAPSTPPSVPFTFSSPIV
KATAASPPTFSPSSGFTFSAPTMKTGPSYSNGKIVPTVAPVKSVASEEKEFEGPFKPAKV
LKQGSVLDILKGPGFASPAQNAVDKPLPSISTSSAALSGFGDKFRPPAGSWSCGTCLLQN
KSSDKTCVACLAPQPNTDSASKSDSKPTEAPASISSLFAPPAGSWDCDTCLVRNKPDVVK
CVACDTSKPGTGVKSRLTLPALSDASSTLSATSSATTTATTTASSATGLLGFGDKFKKPG
GSWDCDVCMVQNKAQDVKCVACQSSKPGAVAASVSTPVSAPASTAAPLIGFGDKFKNPEG
SWECEVCCVQNKAEDQQCVACQSAKPGAKIESKGFSSSFGVQSNSTESGSSAFKFGTSST
DSTSAGLKFGGTFSDTTSTTSGFKFGFGSSNSTSKSEGFKFGGLSSDAASGGVTLGCASS
ESTAKTESLSKGFTFGGSVDDSLEKKTKSQDSSTGFKFGGDGGITFSSQASGSENSAFLF
GAKPSEKGSSDSSFSFSVPPSKAEKDAPASSETVSTTATTTAANVIPIFGKSLVAESSAL
RFGEPSTKSQTLVTSTFTFGKTEEKKDTSAPSGAFLFGASKEADKPAPTLGFSFGESDPP
KDFPKPTLTFGKPADSAEAPKPSFSFGQSMTETSAPKPPFGLMANSSSTPASSSSIPSLF
GTPTTSSLTPTPAPSSTFVFGQNTSTDHTVAKTFMFGQQPQDSQPAPPAAPSAAPAPVQP
FQFGSGTNSSSTAFTFGAVASSTPASSAPAPPANPSPFVFSSTTPSSGFGSGQTPIFGQS
ASQPSAPAFGSAAPSFSATASPASAFGAKPNSASVFGQQANPAPTFGSAASSTAQGGFQF
GSTGGFGAQGSSNSVFAFGAGSAAPATPAASPAMPTLNPPSGGGFSFGQTPSFNIGSGKS
FNATPSGQTSVAGRKIKTAVRRRK
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagagcagaatccacgccgattagtttgcctgaactacgtgagggaagatcc
ctgttgggtgattccagcaacagcgaagtgcagatagctgagacagcggccgatcaaaat
gacgtaatcacgcagccagagttgagttcggagcaggtgaatgcgaaagaggcgcgtggg
gccgaatcaccggggaatgaggaacaaatatctgagtcagtgttgagcagttcagtgcta
aactccagtcagttgggggattcacccttctacccagggaagaccacgtatggaggagct
gctgcgatgagatcggctcgttcgcgtccagctactccttaccagcctcccgttaggaga
cagataaaggcaaagccagctggagctcaaccctgtggagtaaccagtgccacagcgaga
cgcatcctacagtccctggagcgcatgtccagtcctcttgctgatgcaaaaagaattccg
tctacagtttcatcacctctgtcagcttcactgaatcacacagaccttgatgtttcaaat
tttcaggcaaagaggaaaaggctggagccgtcagtccctcctgtgcaaaagctggtggtc
cctgcagctgctgcagtgtctggtaaccgttcggtatcctttagaccatcactgacccca
ggtggagtgaacagaggagtggagaaaaacaacagggagactccggtaagacaatcacct
caaatttcagatcatggccaggctccctctcccagcacaagcagtttgtcctaccccttg
tccagcacacctgcagtcagtagcgctggttcaatagggggcaaaatgaagagggatagg
gccatcagaccttcatccaaaaaacctgaagatgagtttgtcgaggaaccagacctgccc
cctgcttctcttcccagcagtttcactttgccaacattaaatttctcctctcctaccccc
acctcatcgctcccctcaaaaccatttgcgactgcctctgaggaaccggcagcaaataag
gagccagctgcaccatccacaccaccatctgtccccttcacgttctcttcacctatcgtc
aaggcaacagctgccagtcctccaactttctctccatcatctggattcaccttcagtgcg
cctactatgaagacgggcccctcttactccaatgggaaaattgttccaacagtagcacca
gtcaaatcagtggccagtgaagaaaaggagtttgaaggacccttcaaacctgcaaaggtt
ttaaaacagggcagtgtattggatatacttaagggacctggatttgcatcccctgctcag
aatgcagttgataaacctctgccgtctatatcaacatcctctgctgctctttcgggtttt
ggggacaagttcaggccacctgcagggtcatggagctgtggtacttgtctactgcaaaac
aagtcctcagacaagacgtgtgtagcttgtcttgcaccgcaacccaacacagactctgcc
tctaaatcagacagtaaacccacagaagctcctgcgagcatcagctccctcttcgctcct
ccagctggtagctgggactgtgacacatgtttggtcaggaacaaaccggacgtagttaaa
tgtgtagcttgtgacacgtccaaaccagggactggagtgaaatccagactgactttacca
gctctttctgacgcctcgtccaccctctctgccacctcttctgcaaccaccacagcaaca
acaactgcttcttcagcaactggactgttagggtttggggacaaatttaagaagccaggg
gggtcttgggattgtgatgtatgcatggttcaaaacaaggcacaggatgtgaaatgtgta
gcctgtcagagctctaaacctggagctgtagccgcatcggtctcgaccccagtctctgca
cctgcaagcactgctgcgcctttgataggattcggggacaagtttaagaatcctgagggg
agctgggagtgtgaggtgtgctgtgttcagaataaggcagaggaccagcagtgtgtggct
tgccagtcagcaaaaccaggggctaaaatagagtccaaaggttttagttcatcatttggc
gttcagtccaacagtacagaatcaggttcatctgcttttaagtttggtaccagctctacg
gactcaacctctgctggactgaagtttggaggcactttctcagatactacttccaccaca
agtggatttaaatttggatttgggtcctccaactcaacctcaaaatcagagggcttcaaa
tttggaggcttatcctcggatgcagcttctggtggggtcacacttgggtgtgcctcatca
gaatccacagcaaaaacagagagcttgtcaaagggctttacatttggtggatccgtagat
gactcgcttgaaaaaaagactaaatctcaggattctagtacaggatttaaatttggtggt
gatggtggaatcactttcagctctcaagcttctggctccgaaaactcagcatttttgttt
ggagctaaacccagtgagaaaggaagctcagattcatcctttagtttttctgtgccccca
tccaaagctgagaaagatgctcctgcttcctcagaaacagtttcgaccactgcaacaacg
acggcagcgaatgtcattcctatttttggcaagtctttagtagctgaatcttctgcattg
agatttggggaaccatcaacgaaatcgcaaactctagtgacgtccaccttcaccttcgga
aaaacggaagagaaaaaggacacctccgcaccctccggtgcattcttattcggtgcttcc
aaggaagctgacaaaccggcaccaaccttgggcttctcttttggcgagtcggaccctcca
aaagatttccccaagcctacacttacatttgggaaacctgctgattcagcagaagcccca
aaaccgtcatttagttttggacagagcatgacagaaacatctgctccaaagccccctttt
ggcttaatggccaactcctcaagcaccccagcttcctccagctccattcccagccttttt
ggcactcccactacctcttccctgactcccacacctgcgccctcgagtacctttgtgttt
ggccagaatacctccactgatcataccgtggcaaagactttcatgtttggacagcagccg
caggacagccagcccgcacctcctgcagcaccttctgctgcacctgccccagtacaaccc
ttccaatttggctctggtacaaactcatcctccactgcattcacttttggtgccgttgcg
tcctccaccccagcctcttccgccccagctccacctgccaacccttccccatttgtcttc
agttctaccacaccttcatctggctttggttctggacagacccccatcttcggtcaaagt
gcgtctcaacccagtgctccagcatttggttcagcagcaccttcgttctctgccactgct
tcgccagcttctgccttcggagccaagcccaactctgcctctgtatttggtcagcaagct
aaccctgcacctacgtttggatctgctgcttcctccacagcccaaggaggattccagttt
ggaagtactggtggatttggagcacaagggagcagcaatagtgtgtttgcatttggggct
ggatcagcagctccagcaactcctgccgccagtcctgccatgcccactttaaatcctccc
tctggtgggggcttcagctttggtcagaccccttcttttaacattgggtcaggaaagagt
ttcaacgcaacaccatctgggcagacttcagtcgctggacgtaaaatcaaaactgctgtt
cgacgcaggaagtaa
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