Carassius gibelio (silver crucian carp): 128030726
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Entry
128030726 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128030726
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128030726
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128030726
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Endonuclease_7
zf-Nse
DUF4428
Motif
Other DBs
NCBI-GeneID:
128030726
NCBI-ProteinID:
XP_052474555
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Position
A2:20351121..20471337
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AA seq
639 aa
AA seq
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MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASISCQQPRPFGVPVSVEKDIHL
PFNNGSYTFASMYHRQGAVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPLEDRDGAGGGYQSAFTPAKRLKGCLEAEASPHLRYSDAEGKEYDFGGAQISSSS
PNAHKAGEDVGKKIFAVSGLLSDRETSSSPEDRIERCKKKVSLYDSQAPICPICQVLLRP
GELQEHMEQEMDRLTHMHISKNSSHKDINAAPGTPKSLLLSVHIKREGESPVVSPLSSDE
AHHSDRYQTFLRVRANRQTRLNVDDLCWCRRNAKESFKSPPIPVPRGVPLAPCCLRHARI
GKMKRRKPEDGQVCPLCSAPLTGTEEEMSRHVEQCLFKREGGTEEDFADVEGENGTRFEE
YEWCGQKRVRATTLLEGGFRGTGFAMCSTKESHDSDADLDVDGDDTLEYGKAQYTEADII
PCSGEDQGEAKEREALRGAVLNGGVPSNRITPEFSKWASDEMPSTSNGESSKQEPSSSSS
SSTPRTCKNSEIEKITEDSTATTLEALKARIRELEKQILRGDRYKCLICMDSYTMPLTSI
QCWHVHCEECWLRTLGNKKLCPQCNTITSPGDLRRVYFA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcaccgggcagcttttaaaatggagagctcctcctacctgcccaacccatta
gcatccccagcgcttatggtcctagcatcaacagcggaggccagccgcgatgcctccatt
tcctgccagcagcctcgccccttcggcgtgccggtttctgtggagaaggatattcacctt
cccttcaacaacggttcctacacgttcgcctccatgtaccaccgacagggagccgtacca
ccaggcttccccaatagggacttccctccttccctcctacacctccatcatcagtttgcc
cctccaaatctggactgctcccccattagcatgcttaaccacagtggtgttggggccttc
cggccatttgcctctcctctggaggaccgagatggagcgggaggtggataccagtccgcc
tttaccccagccaagcggctaaagggctgcctggaggccgaggcctccccgcacctgcgc
tactcggacgcagaaggaaaagagtatgactttggtggtgctcagatctcttccagctcg
cctaacgctcacaaagccggggaagatgtggggaagaagatcttcgcagtgtcaggcctg
ctgtcggaccgagaaacctcgtccagtccggaggatcgcattgagcgctgtaagaagaag
gtgtcactctatgacagtcaggctcccatctgccccatctgtcaggtgctgctgcgtcca
ggagaacttcaggagcacatggaacaggagatggacaggctcacccacatgcacatcagc
aagaactcatcacacaaggacatcaatgcagctccaggcacaccgaagtctctcctgttg
tcagtgcacatcaaacgtgagggcgagtctccagttgtgtccccgctctcctctgatgaa
gctcaccattctgacagataccagacatttttacgagttcgagctaacaggcaaacacga
ttgaatgtcgatgacctctgctggtgcaggcgcaacgccaaggaaagtttcaaaagtccc
ccaatcccagtgcccagaggagtgcccctagccccttgctgcctgcggcatgcccggatt
gggaagatgaagcgccgaaagcctgaggatggacaggtatgtccactgtgcagcgccccg
ctgacaggaacggaggaggaaatgagtaggcatgtggaacaatgtctgttcaagagggaa
ggtggaacagaagaggattttgccgatgtcgaaggggagaacggaacgcggtttgaggag
tacgagtggtgtggacagaagagggtccgagctactacgttactggaaggtggtttcaga
gggacaggctttgccatgtgtagtacgaaggagagccatgatagtgatgcagacctggat
gtggatggagatgacacactggagtacggcaaagcccagtacactgaagcagacatcatt
ccttgttctggagaggaccagggagaggccaaagaacgtgaggcactgcgtggggctgtt
ttgaatggtggtgtgccatccaatagaataacaccagagttctcaaaatgggccagtgat
gaaatgccatccaccagtaatggtgagagcagcaaacaggagccgagctcttcatcttcg
tcctccacgccgaggacctgtaaaaacagtgagatcgagaagataacagaggactcgaca
gcgaccacactggaggcactaaaggcccgcatacgagaactggaaaagcagatcctcaga
ggagaccgatacaagtgtctcatatgcatggactcgtatacaatgcctctcacctccatc
cagtgttggcacgtgcactgtgaagaatgctggctaaggactctgggaaacaagaagctc
tgcccacaatgcaacaccatcacgtcgccaggggacctcaggcgtgtctatttcgcctga
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