Carassius gibelio (silver crucian carp): 128030742
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Entry
128030742 CDS
T08819
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128030742
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128030742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Motif
Other DBs
NCBI-GeneID:
128030742
NCBI-ProteinID:
XP_052474593
LinkDB
All DBs
Position
A16:15579341..15616722
Genome browser
AA seq
2647 aa
AA seq
DB search
MRPPKKQRRRSPLSTRAKGARKRVGKLEEHSQTTPPCPSHQKNTPSKEDSSQDKHIKSSN
FLNSEGLKEQITERTVETSKSEGNEEIVNKAKTPKNVNTNSLTDNTDSIKIASNAHENSH
SNSTEICNRNTQNFTSTNSKGINQHANSTASNTQNTNAAANSLNKNNSLSASHTSTTPSS
RKTATFKARVPKKKYMYEHQAFSTFPISSTPVAQLTIHSNHLSSPHNSISQTTTPVVRND
LVIADISEMGKIASTETLKGDRIKGDMLKSEVPSEGEKVVQIMEVDGYGERAPNSVRSSS
TDTASEHSVDMEVVEPSCVQLNSGNHVRAPRRFNLSNSSTLSVFLTPNHIQTEQVGSATI
AEALAKGLKNQRVLARRRPRTNLKKDEKLIKEYIFFCGVVRGSSREQLNVELQINGEGTL
LSYPFHTLVSRPHQPIDLILDAPPPGSEPVEVGTRVCVPYGGDKGRELYREGVVAQVDSH
LACPYMVLLQEDLEQEKERCSSEEVQQTSSTKNVWVTHQNLRLLVPPWDGVMREKEQEER
EHREEIEVERELCQLSEGMDLVSAAPPRENCRFPSPDTGVHHYGSTHLSSSTSPAVVMVA
NSMFSLATRKNDDVTGNRERIREREHERKQLKTPEVDMEVLQLNMAPLRDGGGPIVSGGP
KASVPNQHRQILSKPPGYRSPITVVRGISGTSLGSPQPSPSPAVLGSDGGTSHPIPPSVP
PSPSSRGSLTPLEKTPTPSQTSTPIPGSSASSSASSSRSRTPLSAAQQKFKKGDVVCTPN
GIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSGGGGESSSGT
VTPSDLRGRASSEFDWDETSRDSSETSSRGTDSRPRLGLPLLLPQDFSRFDFDECEAATM
LVSLGSRSVTPSFSPISNQSPFSPTPSPSASPLFGFHPANFSPVTASPVLPPRRHKNPSG
TNSGVLKHGTGGTEREKDRHLSSVVPSFHTNLTFTVPMSPGKRRTDAPPPPAPLSQEYGK
PDQEQSCRDSSLVTNLCIISTQTTAVTHPQRLTSTTVSSSPTSPLCLESGSQCTVSQQPL
RDSPVIVRNPEVPLIKFTELPLTRVAEVDRTSSTENIQTGLHSETGLHVPVPINAASTNG
SVLLQNATSTLVLVSTTSSFPNPTPAGLPSQSSATLACISVPSPVPRPGLNGAGDGGGQD
KSGQVTLQQPVPCHPAPTALLPLILPTETLHPVPCKEIIMGRPGTVWTNVEPRSVPVFPW
HSLVPFLAPTQSDLSAQPGEGQQTVSHPQTASLKKEAQSGSVLKEIIEGAPNPSSRPTPS
ADELPPEREKDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSLSALPKDDKT
SPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYH
DLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEPPSVSMGMEL
KGVGPGMVSVSERVGAEGQGQLPRPRAFSQSAMHNLERSERGNPQALAELAQMCGDGGQV
ARRGALSQTQRGVSEDMTSDEERMVICEEEGDDDVIDDSYPGSSIDLKCKERVTDSDSEN
GSGDEGERKRVFAPVICSSSYGPGHGRSVSLSSYPSSRRFSDASSKRKRAVEGGDGERRE
GEGAVSQPSAGQSILLSSAGGVSSVLGAVRVASTVVTNVVRPVVSTPVPIASKSPHDRKP
TPPQTQLFIGPGTTGNPATASGGGGGYYSSSSPNPVSASGAQGGLVTNLVLGGTFQAPPG
VQLLTPPHPQNPASPASAPLTHSNGPLPLPVLQSHILPSASITPSSGQKPMTQVQYIIPT
LSTNNPKSPSPQQAGQPTSIFTLPTALPTHASLANGKQSGYVSSPAVGVVSPGARVQTQS
PVLQGKMLVPMATVRAAPAPPHHFPLVAPPLPVQNGGQAGSKVRPQMIIQIAPMPVVQSQ
LPSTGPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSAPGVPSPLPLVPT
TTGSSSQTASATPGSAYVPSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPSAPHAPA
ISSIYTSTNVTLATGVVSMGTVSPSVVYTVSSSSSPSPHILPKYTTMTSMTSVTSDRQGN
ISTHSERQLHQERTLDRQHTDSHVYTQSSERQTEKVSLFQPDKQFQFPSKSSSSSVAPPP
GTSPGSPAQTSHSGSAPGTPKLITPRPPQKVKATVANIPVGSYDGGGRGKEREKERDREK
EREREKDKESASRFSFEVDKAAETSSPATFSPEEGSAEAESATPTGRGKDANAKEAEWKD
SHPSSPLPASSGSDPAPPQSHGDKDAPPKKVKARPPPLKRPFDSVDKVLSEVYFEERFAK
LPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPISPKRKSRRRSSCS
SEPNTPKSAAKCEGDIFTFERPGNTSPPTEPSSFCSLYHPASAALSGTDGEDVLGELEFD
KVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARYADIFPTKVCLQLKIREVRQ
KIMQTAAPSELAGTSDISSLPGPSGAAVAASDIAAGAEPQEKEAEREGEQNSSEEPRNAD
DSQDSTR
NT seq
7944 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccaaagaaacagagaagacgctctcctttatcgacaagagcaaaaggagca
agaaaacgagtgggcaagcttgaagaacattcacagacaacaccgccttgtccttcacac
cagaaaaacactccatccaaagaggatagctctcaggacaagcatatcaagagtagcaac
ttcctaaacagtgaagggttaaaagagcaaataacagaaaggacagtggaaacatcaaaa
tctgaagggaatgaagaaatagtgaataaggcaaaaactcccaagaacgttaatacgaac
agtttaacagataatacagactcaatcaagatagccagcaacgcacatgaaaattcacat
agtaatagcacagaaatctgtaacagaaacacacaaaactttactagcacaaacagtaaa
ggtatcaaccaacatgcaaacagcactgctagcaatacacaaaacacaaatgctgcagca
aacagtttaaataaaaataactctttgagtgccagccacacttccaccacaccttccagt
cgaaaaacagccactttcaaagctagggtgcccaagaagaaatacatgtatgaacatcaa
gctttcagtacttttcccatcagttcgacccctgtagctcaactcactattcatagcaac
catctaagttctccacacaactccatttctcagaccactactcctgtggtcagaaatgat
ttagttatagcagatatttctgaaatggggaaaatagcaagcacagaaactcttaaagga
gacagaattaagggtgatatgttgaaaagtgaggtgccttccgaaggagaaaaggtggtc
caaattatggaagtagatggatatggggagcgagctccaaattctgtgcgctcatcatcc
acagacacagccagtgaacactctgtggatatggaggtagttgagccctcttgtgtgcag
ctaaattcagggaaccatgtaagagcgccaagaagattcaacctctccaacagttcaacc
ctgtctgtcttcttgacccccaatcacatacaaactgagcaggtagggtctgcaacaata
gcagaagcactagctaaaggactaaaaaaccaaagggtgctagcacgtagacggccaaga
actaatttaaagaaagatgagaagttgatcaaggaatatatttttttctgtggtgtggtg
cgtgggtccagtagagagcagctgaacgtagagttgcagattaatggggaggggacactg
ctctcatatccttttcatacattagtaagtcgcccacaccaacccattgacctcatttta
gacgccccacccccaggaagtgaacctgtggaggttgggacgcgtgtttgtgtgccttat
ggaggagataaaggtagagagttgtacagagaaggtgtggttgctcaggtagactctcat
ttagcttgcccctacatggtgcttttgcaagaggatttggagcaggagaaagaaaggtgc
agcagtgaggaggtgcaacagacatcaagtacaaagaatgtatgggttacccaccagaac
ttgcgcctccttgttccaccatgggatggggttatgagagagaaagaacaggaggaaaga
gagcacagggaggagatagaagtggagagagagctttgtcagttaagtgagggaatggat
ttggtaagtgcagcccctcccagggagaactgcagattcccttctccagacacaggggtt
catcattatggaagcacacatctttcatcttccacttcaccagcagttgttatggtagca
aacagtatgtttagtttagcaactaggaagaacgatgatgtaactgggaatagggaaaga
attagagaaagagaacacgagcgaaagcaactgaagactccagaggtggacatggaggtt
ttgcagctgaacatggcacctctcagagatggtggagggcccatagtctcagggggacca
aaagcaagtgtgcctaatcagcacagacaaattctttccaaaccacctgggtatcgaagt
cccattacagtggtgcgaggcatctctgggacttctttaggaagtccacagcccagccct
tcacctgcagttttagggtctgatggggggacctctcaccccataccaccctctgtacct
ccttcccccagttccaggggttctttgacacctctagaaaagactcctacaccttcacag
acctccaccccaattccagggagttctgcttcttcttctgcttcctcctcaagatcaagg
acaccattgtcagctgcccaacagaaattcaagaaaggcgatgtggtttgtacccctaat
ggaatccgtaagaagttcaatgggaagcagtggcgccggttgtgctctagagatggctgc
atgaaagagtcccagcgtcgtggctactgttctcgtcacctctccatgcgcaccaaagaa
atggagggagcagtgggagagagggggagtggaggaggtggagagagtagctcaggtact
gtgaccccttcagatctgcggggtcgtgctagcagtgaatttgattgggatgagacttct
cgtgacagtagtgagacaagcagccgaggtactgactctcgtccacgtcttggcttgcca
ttactgcttcctcaagatttctctcgttttgactttgatgaatgtgaagctgcaactatg
ctggtatccctgggctcaaggtctgtaacaccctcgttctcaccgatttcaaatcagtcc
ccattctcacctacaccatccccatcagcttcaccactttttggctttcaccctgcaaat
ttcagtcctgttactgcttccccagttttgcctcctcgtcgccacaaaaaccctagtggt
accaacagtggtgtcctaaaacatggaacaggaggcacagagagagagaaagacagacac
ttgtctagtgttgtgccatccttccacactaatctaaccttcacggtacctatgagtcca
ggcaaacgcaggactgatgcgccacctcctccagctcctctgtcgcaggaatatggcaaa
cctgatcaggaacaaagctgtcgggactcttctcttgtaacaaatctctgtattatctct
actcagaccactgctgtcacacacccccaaagactgacttcaactactgtctcttcctca
cccacttctcccctatgcttagaatcaggttcacaatgtacagtttcccagcagcctttg
agagactctccagtaatagtgagaaatcctgaggttcctttaataaagtttacagaactg
ccactgactagagttgcagaggtggacaggaccagttccacagaaaacatccaaactggt
ctacattcagaaacaggactacatgttcctgttccaattaacgctgcttccactaatgga
tctgtcttactgcagaatgccacctcaactcttgttctagtgtctactacctcttccttt
ccaaacccaacccctgcaggtctaccttcacaatccagcgccaccttagcctgcatatca
gtgcctagccctgtcccaaggcctggtctcaatggtgcgggtgatggagggggccaagat
aagagtggtcaagtgacattgcagcagccggttccttgtcaccctgctcctactgccctg
ctgcctctcatacttcccactgagaccttgcatcctgtgccatgcaaagaaatcatcatg
gggcgacctggaactgtgtggactaatgttgagcccagatctgttccagtgtttccttgg
cattcattggtccctttcctggcacccacccaatcagatctgtcggctcaacctggtgag
ggccaacaaactgtcagtcatccgcagacagcttctctgaagaaagaggctcagagcggg
tcagtgctgaaggagattatagagggagcacctaacccttcctcacggcccactccctcc
gctgatgaactgcccccagagagagagaaggatgcggagcgagagagacctgacagtgaa
acagagagtgacgtggatgatccatttttccccggtgttcttcctgatccgccaatttct
gcgtctcctggaaagcgtagatctcagtccctcagtgcactgcccaaagatgacaaaacc
agtcctggaaagagggagaaagatcacatccggaggcccatgaatgcgtttatgatcttc
agcaagcgtcatcgtgcgctggttcatcagagacacccaaaccaggacaaccgcactgtc
agcaagatacttggagagtggtggtatgctttgggacccaaagagaaacagaaataccac
gatctcgcatttcaggtgaaggaggcacactttaaggcacatcccgactggaaatggtgt
aataaggacagaaagaaatccagcagcgagggacgaggtgttccagggggcaaagacatc
cgcgagaggagcatgtcagaaaccacagaacctccatctgtgtcaatgggaatggagctc
aaaggggtggggcctgggatggtgagcgtgtcagagcgagtcggagctgagggacagggt
caattgccccgccctcgtgccttctcccagagtgccatgcacaatctggagaggagcgag
agaggcaatccacaggcactcgctgagctcgcacagatgtgtggtgatggtggtcaggtt
gcaaggcggggtgctctctcccagacacagaggggggtaagtgaggacatgacaagcgac
gaagagcgtatggtcatctgtgaagaagagggggatgatgatgtcattgacgactcgtat
ccaggcagctccattgacctgaagtgtaaggaaagggtgacagacagtgatagtgaaaat
ggatctggagatgaaggagaacgcaagagagtttttgctcctgtgatttgctcctcgtct
tacggccctggtcatggtcggagcgtatctctctcctcctaccccagctccagacgcttt
agcgatgcttcctcaaagagaaagcgagcagtggagggaggtgatggagaaagaagggaa
ggtgaaggagcagtgtcccagccctctgcaggtcagtccatcctgctcagttctgccggg
ggagtgtcatcagtgctaggagcggtgagagtggcgtccactgttgtcactaatgtggtg
cgacctgtggtcagcacgccggtgccgatcgccagcaagtccccacatgaccggaaaccc
actccgccacagacacagcttttcattggacctggtaccacaggaaacccagcaacagct
tcaggtggagggggtgggtactattcctcatcatcgcccaatcctgttagtgcatcagga
gctcaaggggggctggtgaccaatctagttttgggaggcacattccaagccccacccggt
gtacagcttctcacaccccctcatccacaaaacccagcctccccagcatcggcccctctt
acccatagtaatggtccacttcctctgcccgttctgcagtcacacatccttccctctgca
tcaataaccccttcatcgggccaaaaacccatgacacaggttcagtacattatccctacc
ctctctaccaacaatcccaagagcccctcccctcagcaggccggtcagccaaccagtatc
ttcaccctacctacagctctgcccactcacgcctcgttggccaatgggaagcagtcggga
tacgtctccagtcctgctgtgggtgtagttagcccaggagccagagtgcaaacacagtca
ccagtcttgcagggcaagatgctggttcccatggcaacagtgagggctgctcctgccccc
cctcatcattttcccttggtagcccctcctcttcctgttcagaacggaggacaagcagga
agcaaggtgagacctcaaatgattattcagattgcgccaatgcctgtcgtccagtcgcag
cttccctctacaggaccagtgcagcctgggagcccgttttctgttactatgggaacagct
acagtggtggccccaggctctaccccgtctcagaccgtgctgctaccgcccccacctaca
agaatcacttatgtacagtccgctcctggggttccttctcctttgccgttagttcccaca
acaaccggctcctcctctcagacagcttcagcaacacctggatctgcttatgtcccgtct
cccttggccacctttgcagccatcgctcatccggggcagactttggtgcagccactgatc
gcaggtcagccatcactgttggccccggcccagtctcccagcgcccctcacgctcctgcc
atctcctccatctacacctctacaaatgtgaccctggctactggggtggtgtctatgggt
acggtgtcacccagtgtggtgtacacggtgtccagttcctctagcccatctccacacatc
cttcctaaatacaccacaatgacctccatgacctctgtaacctcagacaggcaagggaac
atatccacacattctgagcgacagttgcaccaggagcgaactctggaccggcagcacaca
gacagtcatgtctacacgcagtcctctgagagacagaccgagaaggtctctctcttccag
ccggacaaacagttccagttcccgagtaaaagcagcagcagttcggttgcacctccaccg
ggcacctcacctggaagccctgctcaaacctctcattctggcagtgctccggggacaccc
aagctgatcacgccaaggcctcctcagaaagtgaaagccactgtggccaacatcccagtg
ggcagttatgatggaggagggagaggcaaagagcgagaaaaggagagggacagggagaaa
gagagagagcgagagaaggataaagagagtgctagtcggttctcatttgaggtagacaag
gcagccgagaccagctcccctgcaaccttttcaccagaggaggggtccgcagaagcagag
agtgctacacctactggccgtggcaaagacgcaaatgctaaggaggctgaatggaaggac
tcccacccttcttctccattacctgcttcctctggatcagatcctgctccgcctcagtct
catggtgataaagatgcaccacctaaaaaagtcaaagcccggcccccaccactcaaacga
ccgtttgattctgttgacaaggtcctgtcagaagtgtactttgaggagcgcttcgcaaag
ctgccagaattccgtccagaggaggttctgccttctccaaccctgcagagtctggccacc
tccccacgagccatactgggcagctaccgcaggaagaggaaaaactccaccgacctggac
tcatccacagaagatccaatctctccgaaaaggaaaagccgtcgcagatctagctgcagt
tcagagccaaacacacctaaaagcgctgcaaagtgtgaaggggacattttcacctttgaa
aggccaggtaacacttcaccacccacagaaccgtcatcattctgcagcctgtatcatcct
gcttcagctgctttatctggtacagatggagaggacgtgctgggggagctggagtttgat
aaggtgccctactcctctctcaggagaactcttgatcagaggagagctcttgtcatgcag
ctattccaggagcatggcttcttcccttcagctcaagctactgctgcgttccaggcacga
tacgctgatatcttccccactaaggtttgtttacagctcaagatccgagaggtccggcaa
aagatcatgcaaacagcagctccgtcggaattggccggcacttcagatatatcctccttg
cctggaccttctggggcggcggtggcggccagtgacatagctgcaggggcagagcctcag
gaaaaagaggccgagcgcgagggtgagcagaacagctcggaggagcccagaaatgctgac
gattcacaggactccaccagatga
DBGET
integrated database retrieval system
