Carassius gibelio (silver crucian carp): 128030810
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Entry
128030810 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128030810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128030810
03021 Transcription machinery [BR:
cgib03021
]
128030810
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128030810
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
128030810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
128030810
NCBI-ProteinID:
XP_052474772
LinkDB
All DBs
Position
A16:15496243..15519919
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AA seq
726 aa
AA seq
DB search
MTKNGPVASMDYSHMWLPGMCLEYQGGCQVGLFRGLLMDSLEMQGRLRSSGQEDIRMLKP
VEVENPAADSPMESTDSERNGSDSNNQVQPMKINPFSLSPTLSSSPKTKVEDCGEMSPAA
IQTTHAQTALPHTQLMLTGGQLAGLTALLPAQQQLLLQQAQLLAAAVQQSHAAHAANRQQ
AQQQASQHAAQPQSQGQSQGTQEQTAAPVPPPPHQLSLSQPIQLTAQDIQQFLQLQQLVL
VPGHTLPSPAQFILPQTQQGQQGLLSTPNLIPLPQQNQGSLLAAPPRLSLQAQREKVADS
IVNTVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFE
ALNLSFKNMCKLKPLLEKWLTDAVEANILQNIFCYIPQKKESHTETMSMDSTLPSPSALS
SPSLGFDGLPGRRRKKRTSIETNIRVALEHSFITNQKPTSEEILLIAEKLNMEKEVIRVW
FCNRRQKEKRINPSSATPPLPSQPQPTSHKPPCYSPHMMPSQGPSQTVSSLSTAVTTMSS
VCPLTPSGPSLSSAPSPVTPPPRSDASPAPPTHSTLSLNTGSWHKKNGDVSNYINDFAAS
LRNTVRGVKTGINQALLGSNPLATIQALAASGGQLPISSLEGSSKVLICGSGGQGAGLPS
SLFLNHSSLLPRATGTSMGLGGSALAKTSFPVTGGMSPSPCSSPISSCSSGELLHSPHSI
GGAKIE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaacggtcctgttgcatccatggattactcgcatatgtggttgccaggtatg
tgtctggagtaccagggaggttgccaggttggtctcttccgaggtttattgatggattca
ttagaaatgcagggacgtctgaggtcatcaggccaagaagatatcagaatgttaaagcca
gtagaggttgagaatccggcggcagactctccgatggagagcacagactccgaaagaaac
ggctcagattcaaataatcaggttcagccgatgaaaatcaaccctttctcactttctccc
acactgagcagcagccccaagactaaggtggaggattgtggtgagatgtctcccgctgct
atacaaactacacatgctcagacggcccttccccacacacagctgatgctaacgggtggt
cagctcgcagggttgactgcacttttgccagcacagcaacagctgcttttacagcaggcg
cagctcctcgctgcagctgtgcagcagtcgcatgcggcccacgcggccaatcgacagcaa
gcccagcagcaggccagtcagcacgcagctcagccgcagtcgcagggccaatcgcaggga
acacaggaacaaaccgccgcccctgtcccgcctcctcctcaccagctttccctttctcag
ccaatccagctcactgcgcaggacattcagcagtttctgcagctgcagcagttagtcctc
gttccaggacacactctgccttcacccgcacagtttattttaccacaaacacagcaaggg
cagcaagggctgctatcaacgccaaatctaattccactacctcagcaaaaccaaggaagc
ctgctggccgctccacccagacttagtcttcaagcacagagagagaaggttgcagacagc
atcgtgaacacagtgacctctcatcctgaggagcccagtgatctggaggaactggagcaa
tttgcccgcacattcaaacagagaaggatcaaactgggcttcacacagggtgatgttgga
ttggccatggggaagctctatgggaatgatttcagtcagaccacgatctctcgctttgag
gcgcttaatctcagcttcaagaacatgtgcaaactcaaacctctgttggagaagtggctg
actgacgcagtggaagccaacattcttcaaaatatcttctgttatattccacagaagaaa
gaaagtcatacagaaacaatgtcaatggacagcaccttgccaagtcccagtgctctttcc
tctccttccctggggtttgacggcctgccgggccgccgtagaaagaaacgcaccagcatt
gagaccaacatccgtgtcgctctggaacacagcttcatcacgaaccagaagcctacctca
gaggagatcctactgatcgccgagaagctcaatatggagaaggaggtgatccgtgtctgg
ttctgcaaccgccgacagaaagagaaacgtattaacccctccagtgccacccctcccttg
cccagccaaccccagcccacctcgcacaaacccccctgctacagcccgcacatgatgccc
agtcagggaccatcacagacagtgagcagtctcagtacagcagtgaccactatgtcatcg
gtttgccctttgaccccaagtggcccctccctaagctctgcaccatctcctgtaaccccg
cctcctcgcagtgatgccagccccgcccctccaactcacagtacactaagtctgaacaca
ggttcatggcataaaaagaatggtgacgtttctaactacatcaatgactttgctgcaagt
ttgaggaatacggtgaggggagttaaaacaggaatcaaccaagctcttcttggcagcaac
ccacttgctactatacaagccctagcagccagtggtggccagctgcccatttccagtctt
gagggcagcagcaaggtgttaatttgtggttctggaggccaaggagcaggtcttccctct
tccctctttctcaaccactcctctttgttgccaagggcaacaggcaccagcatgggattg
ggcggttcagctcttgccaaaacctcatttcctgtcacaggcggcatgagtccctcccct
tgctcgagcccaatctcttcctgctcttcaggcgaattgctacacagcccacactcgata
ggaggggctaaaatcgagtga
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integrated database retrieval system
