Carassius gibelio (silver crucian carp): 128030885
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Entry
128030885 CDS
T08819
Name
(RefSeq) LIM domain-containing protein 1-like
KO
K16682
LIM domain-containing protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128030885
03036 Chromosome and associated proteins [BR:
cgib03036
]
128030885
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128030885
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
128030885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
128030885
NCBI-ProteinID:
XP_052474915
LinkDB
All DBs
Position
A16:complement(24291660..24325709)
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AA seq
556 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVKRDAGNNPDFEETRKVFASKMTKIHMQKQ
QEEMARNRMNGSHSKVSDNTFYTKDRPPINSCKQGGEAAAKPPIISGPVAGTPYISYEGQ
KHNFASLPDGSSNRVYDIKETGNVVNPIPVPARSAPSTSPPGTWASRSVYPSPTPSSPFS
NSSSSSSSPGAGQNYSPVSQGYPQTGKSPSQSPTGTCRDAYHQPQQASPVQHCQRDSDHW
SASGPTYLNGGAHNIGTPSSTQVTQPPLSHGGKQGEPSQPKSPAPGNLTVPAATPVESPH
DESSSPSRALKLPCQTLHVQTDQGPSAAEIKLEALTERLEKEMDAQPKAEYFGSCVKCSE
AVYGWSQACQAMGSVYHDSCFTCSACSRKLRGKAFYYVCGKVFCEEDFLYSGFQQSADKC
NVCGHLIMDMILQALGKSYHPGCFRCTICNESLDGVPFTVDTENKIYCVKDYHRVLAPKC
AACNHPILPSEGSDETIRVVSMDQDYHVECYHCEDCHVELNDEEGHRCYPLDGHLLCHAC
HLKHTDPAANNYHSQV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgatgatctgggactcgaggcgagtaaattcatcgaggacttgaacatg
tatgaagcctcgaaggacggcttatttcgcgtgaagagagatgcgggaaacaacccggat
tttgaagaaaccaggaaagtttttgcctcgaaaatgaccaaaatacacatgcagaagcag
caagaggagatggcaagaaacaggatgaatggaagtcactcgaaagtgtcagataacaca
ttttacaccaaagacagaccacccatcaatagttgtaaacagggtggtgaagcagcagcc
aaaccacccatcatctctggaccagtggctgggactccttacatatcttatgaaggacaa
aagcataattttgccagcttacctgatggatccagcaacagggtctatgacattaaggag
actgggaatgttgttaacccaataccagtgccagcccgatcggcaccctctaccagcccc
cctggcacatgggcatcaagaagtgtttacccatctccgacgccatcatctcctttctcc
aacagttcctcctcttccagctcacctggagcgggtcagaattattctccagtgtctcag
ggataccctcaaacagggaagtctccctctcagtcgcccacaggaacgtgcagggatgca
tatcaccagcctcaacaggctagccctgttcagcactgccaacgagactctgaccattgg
tctgccagtggaccgacgtatctaaacgggggagctcataatattggcaccccctcctct
acccaggtgacacaacctccattgtctcatggagggaagcaaggtgagccatcccaaccc
aagagccctgcacccggtaacctgacagtgcccgctgctaccccagttgagtcgccccat
gatgagtcttccagcccttctcgggcgctcaagctgccatgccagaccctccatgtacag
acggatcaggggccatctgcggctgaaattaaattagaagctctaactgaacgcctggaa
aaggagatggacgcccagccaaaggctgagtactttggcagctgtgtgaagtgcagcgag
gcggtgtatggatggagtcaggcgtgtcaggccatgggcagtgtgtaccacgacagctgc
ttcacctgcagcgcttgcagtcgaaagctccgagggaaagccttttactacgtttgtggg
aaagtgttttgtgaagaggactttctgtactctgggttccagcagtctgccgacaaatgc
aacgtctgtggacatttaatcatggacatgatcctgcaggcgctgggaaagtcttatcac
ccaggctgcttccgctgcaccatctgtaacgagagtctggatggagtgcctttcactgtg
gacacggagaacaagatctactgcgtgaaggactatcacagagttcttgctcctaaatgt
gcagcatgtaatcatccgatcctgccctctgagggatcagatgaaaccattcgggtggtc
tccatggaccaggactaccacgtggagtgctatcactgtgaggactgtcatgtggagctg
aatgatgaggagggtcaccgctgctatcctctggacggacacctgctgtgtcacgcgtgt
cacctcaaacacacggaccctgctgccaacaactaccacagccaggtttaa
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