Carassius gibelio (silver crucian carp): 128030924
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Entry
128030924 CDS
T08819
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128030924
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgib01007
]
128030924
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
128030924
Enzymes [BR:
cgib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
128030924
Amino acid related enzymes [BR:
cgib01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128030924
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128030924
Prokaryotic type
128030924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
128030924
NCBI-ProteinID:
XP_052474974
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All DBs
Position
A16:complement(25806393..25823321)
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AA seq
691 aa
AA seq
DB search
MFAAVFGRRGVCQAALRGSRSYGKLHASACQTERLRIFQSLCDRHVTGTAEEHTASRPDL
TIRLADGRTVKGSAGVTSPLQIAKSERVKGAVAGRVNGALWDLSRPLLEDCELQLLGFDS
LEGRQVVWRTGACVLASVMENLFSARVCREGVSDTGLYCDYQLQDNALSLLDVEQRCKQM
AAGKIPLIKLQVTVQDLKELFQDDAVRLRLAEEQMMGDTLSVYRCGDSVGVCSGVLLPHT
GFLKAFKMLQVSPVTLSGSTEASAILRMIGVAFPGEREREEWEREQEEARKRDHRRIGKT
QELFFFHDVSPGSCFFMPKGAHIYNTLTDFIKSEYRRRGFSEVVTPTLYSKSLWERSGHW
EHYSENMFTVTCEPHTFALKPMNCPAHCVMFEQRVRSWRELPIRWADFGALHRNEHSGAL
GGLTRVRRFCQDDAHIFCTPEQLEEEITACLDFVRSVYRVFGFSFHCLLSTRPVPCLGEP
ALWDTAEQQLESSLKRFEERWELNPGDGAFYGPKIDIQIRDALGRQHQCATIQLDFQLPI
RFNLQYSGADGQMYRPIMIHRAVLGSLERMIAILAENFGGKWPFWLSPAQVMVVPVGGGS
ETYGHEVVCRLREAGFMADIDDDRGNTLNKKIRSAQLAQYNYIFVVGEKECASGTVSVRT
RAGKQLGQISLQEVMRSLTELTQTRSNQEEF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggctgtgttcgggaggcgaggcgtctgtcaggcggcgctccgcggcagcaga
agctacgggaagctgcatgcgtctgcctgtcagaccgagcgcttgaggatcttccagtct
ctctgtgatcggcatgtgactggaactgctgaggagcacacagcatcgaggccggatctg
accatccgattggctgatggcaggacggtcaaagggtcagctggtgtgacctcaccatta
cagatcgccaagagtgaacgtgttaaaggggcagtggcaggcagagtgaatggagcgctg
tgggatctgagtcgtcctctgctggaggactgtgaactgcagctgctcggctttgactcg
ctggaggggagacaggtcgtgtggcgcaccggagcgtgtgtgttagcgagtgtgatggag
aatctcttcagcgctcgtgtgtgtcgagagggagtgtctgacacaggcctgtactgtgat
taccagctccaagacaacgccctctctctgttggacgtggagcagaggtgtaagcagatg
gcagctgggaagattcccctcatcaagctccaggtcacggtacaggacctgaaagagctc
ttccaggatgatgctgtcaggctgcggctggctgaagagcagatgatgggagacacactc
agtgtctacaggtgtggagacagtgtgggtgtgtgttcaggtgttcttctgccacacacg
ggcttcctgaaggcctttaagatgctccaggtgtctcctgtaactctgtccggctcaaca
gaggcgtccgctatcctccgaatgatcggcgtggcctttccaggagagcgagagcgagag
gaatgggagagagaacaggaggaggccagaaagagagaccacagaaggattgggaagaca
caggagctcttcttctttcatgatgtcagtcctggcagctgtttcttcatgccaaaagga
gctcatatatacaacacgctcactgactttataaagagtgagtaccggaggcggggcttc
agcgaggtcgtgaccccgacgctgtacagcaagtctctgtgggagcgatcgggtcactgg
gagcattacagtgagaacatgttcacggtgacctgtgagccacacaccttcgctctcaaa
cccatgaactgtcccgcacactgtgtgatgttcgagcagcgggttcgttcgtggcgagag
cttcctatccgctgggcagattttggcgcgctgcaccgtaacgaacactcgggggcgctg
ggggggctaaccagagtccgccgcttctgccaggacgacgcacacatcttctgcacacct
gagcagctggaggaggagatcacggcgtgtttggacttcgtgagaagcgtgtatcgtgtc
ttcggtttctcctttcactgtctcctctccacgcggcccgtgccctgtctgggagagccc
gccctctgggacactgcagagcagcagctggagagcagtctcaagcggttcgaggagcgc
tgggagctgaatcctggagacggggcgttttatggaccaaagattgacatccagatccgg
gacgctctgggccgacagcaccagtgtgccaccatccagctggacttccagctgcccatc
agattcaacctgcagtattctggggctgatggacagatgtacaggccgatcatgatccac
cgggccgtgctgggctccctggagaggatgatcgctatcctggccgagaacttcggaggg
aaatggcctttctggttgtcgccagcgcaggtgatggtggtgcctgtagggggcggcagt
gagacgtacggacacgaggtggtctgcagactgagggaagctggattcatggctgatatt
gatgatgatcgtggaaacaccttaaataagaaaatccgctcggcgcagctcgcacagtac
aattatatattcgtggtgggagagaaagagtgtgcgagcgggactgtgagcgtgaggacg
agagccgggaagcagctcggacagatatcactgcaggaagtgatgcgctcgctgactgaa
ctcacacagacacgcagcaatcaggaggagttttaa
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