Carassius gibelio (silver crucian carp): 128030928
Help
Entry
128030928 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04115
p53 signaling pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128030928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128030928
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128030928
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128030928
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128030928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_2
Beta-prop_EML
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4_3
Beta-prop_WDR90_POC16_2nd
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
zf-RING_10
WDR90_beta-prop_4th
zf-rbx1
UvrD-helicase
zf_C2H2_10
Sina_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128030928
NCBI-ProteinID:
XP_052474984
LinkDB
All DBs
Position
A2:21330061..21344744
Genome browser
AA seq
687 aa
AA seq
DB search
MSNTRQQQQQQSVGSAGSVPGTSSGSTSSSSSGGAGGSSSGAQNGNSSGNGVSSRTLGTV
AEGQSARPGSSSRKRPLYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCIRQ
SLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQVFQDVL
GADQENMDLANVNFILDYLLQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQLQKEL
NFLEEDIKRVEEMSGMYTVSEMDPNLDSTVPQFEAPSPGPSSIIDPTEYMQHTFGSSQGK
RQTWYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKFTRYNS
VRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPV
NEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLM
DPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYD
LRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKN
FVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAVC
WRALPDGESNVLIAANSQGTIKVLELV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacactcggcagcaacaacagcagcagtctgtcggttcagcggggtccgtcccc
gggacgagctctggaagtacgagtagcagtagcagcggcggcgccggtggatcgagcagc
ggggctcagaacgggaacagctcgggtaacggggtgtcctcgcgaactttgggaacggtt
gccgagggacagagcgctcgaccgggctcgtcgagtaggaaaagacccttatacaacggt
ctcatcaatccgtatgaggacaagagtaatgattttgtatgccctatatgttttgagatg
atagaggaagctcacatgacaaagtgtggccacagtttctgttataaatgtatacgacag
agtttggaggacagcaacagatgcccaaaatgtaattatatcattgataatgtggatcaa
ctctaccccaacttcttagtgaatgaactgatcctgaaacaaaaacaaagatctgaagag
aagcgtctgaaacgggatcaccctaatggaaccaaatggcaggtttttcaagacgtcctt
ggtgcagatcaagagaatatggatttagcgaatgtcaacttcatattagactacctgttg
caaaaaaagaaacaactggaggcggaatcacaagctgctcagcgccagatcttaatggag
ttcctcaaagaagccagaagaaataaaagagagcaactggagcagttacaaaaagaactg
aactttttggaggaggatatcaaacgagttgaggaaatgagtggtatgtacacagtgagt
gaaatggaccccaatttagacagtactgtaccccagtttgaagctccctctcctggaccc
agtagcataatagaccccacagaatacatgcaacacacttttggaagctcacagggtaaa
agacaaacttggtacaacagcactctggcgtcacgacgaaagagactgactgcacatttt
gaagatctggaacagtgttatttctccaataggatgtctcgaataacggatgacagcagg
actgttaaccaactggatgatttcatggagtgtctatcaaagtttacccgttacaactct
gtgaggcctctggccaccctgtcttatgctagtgacctttataatggctccagtattgtg
tccagcattgagtttgaccgcgactgtgattactttgccattgccggcgtcactaagaaa
attaaagtgtttgagtacggcactgtgatccaggatgctgtggacattcattatcctgtc
aacgagatgacgtgtaactctaaaattagctgtatcagctggagtagctaccacaaaaat
ctgttagcgagcagcgactatgaggggactgtcattctttgggatgggttcacaggacag
aggtcaaaggtctaccaggagcatgagaaaaggtgttggagtgttgatttcaacctcatg
gaccccaagctcttagcatcaggatcggatgatgcaaaagttaagttatggtccaccaac
ctggacaattcagtagccagcattgaagcgaaggccaatgtatgctgtgtcaagttcagt
ccatcctctcgatatcaccttgcctttggttgtgcagaccactgtgtgcactactatgac
ctgagaaacactaagcagcccatcatggttttcaaaggccacaggaaagcagtgtcctat
gccaaatttgtcaacggagaagagattgtgtctgcatcaacagacagccagctgaaactc
tggaacgtgaacaagccacattgtttgcgctcctttaaaggccacatcaacgagaagaac
ttcgtgggcctggcatctaatggagactatgtagcatgtggaagtgaaaacaactcactg
tacttgtactacaaggggctctccaagacgctattaactttcaagtttgacactgtgaag
agtgtcctggacaaggacaagaaagaggacgacaccaatgagtttgtcagtgccgtctgc
tggcgagctctacctgatggggagtcaaatgtgttgattgcagccaacagtcaaggaaca
atcaaggtacttgagctggtctga
DBGET
integrated database retrieval system
