Carassius gibelio (silver crucian carp): 128030987
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Entry
128030987 CDS
T08819
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
128030987
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
128030987
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128030987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
128030987
NCBI-ProteinID:
XP_052475086
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Position
A16:complement(18937357..18944472)
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AA seq
727 aa
AA seq
DB search
MGRKLDPTIKVKRGPGRKARKQKGAETELSKFLVDDDGPKKLSSRSRKRAVKRAQVTKEP
KQEEKPKKGFTDENSKWLKPVPRKRKIEQSEEDEDSDSQWEEDDDEEGFDKKEMEEEEEE
DDDMVDDYGADEGDEQDSDGEELLPIERAARKQKKQTSKKPESDDDDDDDDDEEKDDLKE
DGEEEEDTVQANIDETEQFKLPGAAERAKEGLLAMDLQTIHQRIRDNVDVLSHFSEKREE
GKERSEYLSLLRSDLCTYYSYNEFLISKLMDLFPVSELIDFLEANEIQRPVTIRTNTLKT
RRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLSGQYMLQGASSFLPVMA
LSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANADRLKSVVGNIHRLGVTNAVI
CNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTGKDEADILRSAHLQKELILSAI
DSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFIRFKERRF
HPSLKLSRRFYPHSQNMDGFFVAKLKKLSNAIPSAPREREDEEESSKTETAASSEQIQKP
ESKQQKPNSTPEKSNMGQKQKLKLKKSETPIITKKTGVKAENKKPNGPKKAKIAKLDGET
SKKNEKPDKMQKVKELNGDSTKEVVMEKKEGSQFEKKNEMKRKNLLKNNTNRMGKNKFRK
LKSMVGQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagctggaccccaccatcaaggtgaagagaggacctggacgcaaggccaga
aaacagaagggagcagaaactgagctgtccaagtttttagttgatgatgatgggccaaaa
aaactttcaagcagatcaagaaaacgagctgtaaaaagagctcaagtgactaaagaaccc
aaacaagaggaaaagcctaaaaaaggattcacagatgagaatagtaaatggctaaaacca
gtgccgaggaagcgaaagattgaacaatctgaagaagatgaggacagtgacagccaatgg
gaagaagatgatgatgaagagggctttgataaaaaggaaatggaggaggaggaggaggag
gatgatgatatggttgatgactatggtgctgatgaaggggatgaacaagacagtgatgga
gaagagcttctgccaattgagagagctgcaagaaaacagaaaaaacagaccagcaagaaa
ccagagagtgacgatgatgatgatgacgatgatgatgaagaaaaggatgatttaaaggaa
gatggggaggaggaagaggatactgtacaggcaaatattgatgaaaccgaacaattcaaa
ctcccaggtgcagcggagcgagcgaaggagggtcttttagcgatggacctacagaccatc
catcagaggatcagagataatgtggatgtgctgtctcacttcagtgagaagagagaagag
ggtaaagagagatcggagtatctctctctgctgcgctctgacctctgcacctactacagc
tacaacgagttcctcatcagcaaactcatggaccttttccccgtctctgagctgattgat
tttcttgaggccaatgaaatccagaggccagtcaccatcagaaccaacaccctgaagacc
aggaggagagacttggctcaggctctgattaacagaggagtgaacctggatccattgggg
aaatggtccaaagtggggctggttatctatgactcttctgttcccattggagcaactcca
gaatatttgtcaggccagtacatgttacaaggtgcatcatcgtttctgcctgtaatggcg
ctttctccccaggagggggaatcagtgctggacatgagcgccgctccaggaggaaagacc
acttatatggctcagctcatgaggaacacgggcatgattgtggctaatgacgcaaatgca
gacagactgaagagcgtcgtgggaaacatccatcgtctcggtgtcactaacgctgtcatc
tgcaactatgacggcagacagttccccaaggtgatgggaggtttcgaccgagtgctttta
gatgctccttgttcggggacaggggtgatctccaaagatccaggagtaaaaactggcaaa
gacgaggctgatattcttcgctcggctcacctgcagaaggagctcatcctgtctgctatt
gactccgtcaatgctgattctccaactggtggataccttgtttactgcacatgctctatt
atggtagaggagaacgagtgggtggtggactatgctttaaagaagagaaatgtaaagctg
gtccccactggactagactttggcaaggagggattcatcagattcaaagaaagacgtttc
catccatctctcaaactgtctcgccgattctatcctcactcccaaaacatggatggattt
tttgtggccaagctaaagaagctgtctaacgccatccccagcgcaccgagagaaagagaa
gatgaagaagaatcttcaaaaacggagaccgcagcctcgtccgagcagatccagaaacca
gagtctaagcaacagaagcccaattcaacgccagagaaaagcaacatgggccagaagcag
aaattaaaactgaaaaaatctgagacgcccatcatcacaaagaaaactggagtgaaagct
gagaataaaaaacccaatggtcccaaaaaggccaaaattgctaagttggatggtgaaaca
tccaaaaagaatgagaaacctgacaaaatgcagaaggtaaaggaactgaatggagattca
acaaaagaggtggtgatggagaagaaagaggggagccagtttgagaagaagaacgaaatg
aaaagaaagaacttgttgaagaacaatacaaacagaatggggaaaaacaagtttaggaag
ttaaaaagtatggttggacagtga
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