KEGG   Carassius gibelio (silver crucian carp): 128031090
Entry
128031090         CDS       T08819                                 
Name
(RefSeq) sorting nexin-27-like isoform X1
  KO
K17936  sorting nexin-27
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128031090
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cgib04990]
    128031090
Membrane trafficking [BR:cgib04131]
 Protein recycling
  Others
   Others
    128031090
Domain-containing proteins not elsewhere classified [BR:cgib04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   128031090
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 RA_2 SNX17-27-31_F1_FERM VirE3 SNX17_FERM_C USP7_C2 PDZ_2 SNX17-31_F2_FERM DUF5394 Sina_TRAF DarA_N
Other DBs
NCBI-GeneID: 128031090
NCBI-ProteinID: XP_052475281
LinkDB
Position
A16:14287493..14305143
AA seq 569 aa
MADVVEGDGTCSAGPSTLHSAALNGSGMSSGTCAGGIVATTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAILSVPQPEMDGLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFGNFVFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSDSDENYNGVSDVELRIAMPDKTTVTIRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVAEKSYQLQKLTEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVVTAISIRHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEAIDKD
NKNCSKDEYLPSVETQKGWRHMNEEIISS
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcagatgttgtcgaaggagacggcacttgctccgctggtccttccacgcttcactcg
gcggctctcaacggctccggcatgagctcggggacctgcgccggcggcatcgtcgcgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggactcgggctatggcttc
aacgtccgcgggcaagtaagcgaaggagggcaactaaggagcatcaacggagaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatccgagcaggagagaaagagttagtcttggccatcctgtcggtt
cctcagccagagatggacggccttgatcccggggacgatggctcatctcagtcctgctat
gactacagcgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggaacag
aacggagagaagtttgtagtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttggcaactttgtg
tttcccaagctgccggggaaatggcctttctccctgtctgagcaacagctagacgctcgc
aggcgagggctggaggaatacttggagaaagtgtgttctgttcgggtaatcggagagagt
gacatcatgcaggagtttttgtcggactctgatgagaattataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttacgatccgggtgcgaaagaattgc
acaacagaccaggtctaccaggctgttgtaacaaaaattgggatggacagcattactgca
agttattttgccctgtttgaagtcattaaccactcctttgcacgcaagctggcccctaat
gagttcccacataagctgtatgtgcagaactatacatctgccatcccaggcacctgcctc
acacttcgcaagtggctcttcaccacagaagaagagattctgctcaacgacaatgagctg
gccatcaactattgctttcatcaggctctggatgatgtgaaaaagggattcatcaaagtg
gcagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
agtattctgaggacttgtgagggctacaatgagatcactttcccgcactgctcctgtgac
tcacgtaggaaaggtcacgttgttacagcgataagcatccgccactttaaactccatgcg
tgcaccgaggatggcactctagagaatcaggtgatagcttttgaatggtcggagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtacgcgcgaggggagaag
aaacctcgctgggtcaaaatcttcactccatatttcaactacatgcacgagtgctttgag
agagtcttctgtgagctcaaatggagaaaagaggttgaggaggaggccatagacaaggac
aataagaactgcagtaaagatgaatatcttccatctgttgagacacagaagggatggagg
cacatgaacgaagagatcatctcctcttga

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