Carassius gibelio (silver crucian carp): 128031090
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Entry
128031090 CDS
T08819
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128031090
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
128031090
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
Others
128031090
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128031090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
VirE3
SNX17_FERM_C
USP7_C2
PDZ_2
SNX17-31_F2_FERM
DUF5394
Sina_TRAF
DarA_N
Motif
Other DBs
NCBI-GeneID:
128031090
NCBI-ProteinID:
XP_052475281
LinkDB
All DBs
Position
A16:14287493..14305143
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AA seq
569 aa
AA seq
DB search
MADVVEGDGTCSAGPSTLHSAALNGSGMSSGTCAGGIVATTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAILSVPQPEMDGLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFGNFVFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSDSDENYNGVSDVELRIAMPDKTTVTIRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVAEKSYQLQKLTEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVVTAISIRHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEAIDKD
NKNCSKDEYLPSVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagacggcacttgctccgctggtccttccacgcttcactcg
gcggctctcaacggctccggcatgagctcggggacctgcgccggcggcatcgtcgcgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggactcgggctatggcttc
aacgtccgcgggcaagtaagcgaaggagggcaactaaggagcatcaacggagaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatccgagcaggagagaaagagttagtcttggccatcctgtcggtt
cctcagccagagatggacggccttgatcccggggacgatggctcatctcagtcctgctat
gactacagcgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggaacag
aacggagagaagtttgtagtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttggcaactttgtg
tttcccaagctgccggggaaatggcctttctccctgtctgagcaacagctagacgctcgc
aggcgagggctggaggaatacttggagaaagtgtgttctgttcgggtaatcggagagagt
gacatcatgcaggagtttttgtcggactctgatgagaattataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttacgatccgggtgcgaaagaattgc
acaacagaccaggtctaccaggctgttgtaacaaaaattgggatggacagcattactgca
agttattttgccctgtttgaagtcattaaccactcctttgcacgcaagctggcccctaat
gagttcccacataagctgtatgtgcagaactatacatctgccatcccaggcacctgcctc
acacttcgcaagtggctcttcaccacagaagaagagattctgctcaacgacaatgagctg
gccatcaactattgctttcatcaggctctggatgatgtgaaaaagggattcatcaaagtg
gcagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
agtattctgaggacttgtgagggctacaatgagatcactttcccgcactgctcctgtgac
tcacgtaggaaaggtcacgttgttacagcgataagcatccgccactttaaactccatgcg
tgcaccgaggatggcactctagagaatcaggtgatagcttttgaatggtcggagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtacgcgcgaggggagaag
aaacctcgctgggtcaaaatcttcactccatatttcaactacatgcacgagtgctttgag
agagtcttctgtgagctcaaatggagaaaagaggttgaggaggaggccatagacaaggac
aataagaactgcagtaaagatgaatatcttccatctgttgagacacagaagggatggagg
cacatgaacgaagagatcatctcctcttga
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