KEGG   Carassius gibelio (silver crucian carp): 128031577
Entry
128031577         CDS       T08819                                 
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128031577
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128031577
Membrane trafficking [BR:cgib04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    128031577
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128031577
  Exosomal proteins of bladder cancer cells
   128031577
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 128031577
NCBI-ProteinID: XP_052475860
LinkDB
Position
A2:22450128..22463307
AA seq 1221 aa
MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCACVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTD
VRGISGVDLFGGSDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSSDANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDDRSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLTKLRKMM
KIAEIRKDMSGHYQGALYLGDISERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAT
GGEGWGEDAELHLDEDGFMDAQEGLGDEGKEEGEGWDVEEDLDLPPELDIPSVGGGGAEG
DGFFVPPTKGTSPTQMWCNNSQLAVDHIMAGSFETAMRLLHDQVGVVQFGPYKQLFMQTL
SRGRTCYLGLPSLPCLHSYPLRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAGRFE
DAVDRFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDTLDQQKR
LCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQTRK
ILAACEKSLTDAHQLNYDPHNPFDICPASFTPLYRGRPVEKCPLSGACYYPKYKGEVCRV
TQVTEIGKDVIGLRVSPLQFR
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgttgaccaaatttgagacaaagtcggcccgagtgaaagggctgagtttccacccaaaa
cggccatggattctctctagtttgcacaacggcgtcatccagctgtgggactatcgcatg
tgcaccctcatcgacaagtttgacgagcatgatggtccagtcagaggtattgacttccat
aagcagcagccactgttcgtgtcaggaggagatgactacaagatcaaggtgtggaactac
aagctgcgtcggtgtctcttcactcttcttggacatcttgactacattcgtaccacgttc
ttccaccacgagtatccctggatcctgagtgcctcagatgaccaaaccattcgtatttgg
aactggcagtccagaacatgtgcctgtgtgctgacggggcataatcactatgtgatgtgc
gctcagttccatccatctgaggacctggtggtgtcagctagcctggatcagaccgtgcgc
gtgtgggatatttccggtctgaggaagaagaacttgtctccgggtgctgtggacacggat
gtgcgtggcatctctggcgttgacctgtttgggggctctgatgcagtagtgaagcatgtt
ctggagggtcatgatcgaggtgtaaactgggcagccttccatcccagcatgcctctcatt
gtgtcaggagcagatgaccgccaggtcaagatctggaggatgaacgaatctaaagcgtgg
gagttggacacctgtcgagggcattacaacaatgtgtcctgtgcggtgttccaccctcgt
caggagctcattctgtctaactctgaggacaagagcatccgcgtgtgggatatgtccaag
aggacaggtgtccagacctttcgcagagatcacgaccgtttctgggtgctgggggctcac
cccaacctcaacctgtttgctgctggccatgacagtgggatgctggtgtttaaactggaa
agggaacgtccagcttacgctgtgtatggtaacatgctgtactatgtaaaggatcgcttc
ctgcgtcagctcgacttcaacagcagtaaggatacagccgtcatgcagctgcgcagtgga
tccaaattcccagtgttcagcatgtcctacaaccctgcagaaaatgctgtgctgttgtgc
actagagctactaaccttgaaaacagcacatatgatttatactccattcccagagagagt
gattcccagaatcctgatgctcctgagggaaagcgttcctctggtctcactgcggtttgg
gtggccaggaaccgttttgcagtacttgaccgcatgcactcactcctgattaagaatctg
aagaatgagattgtgaagaaggtccaggtaccaagctgtgaggagatcttctacgctgga
actgggtctctgctgctgcgtgatgctgatggagttactctgtttgatgtgcagcagaag
cgctccctcgctacggtcaaaatcgctaaagtcaaatatgtggtgtggagctccgatgcc
aaccatgtggccctgctggccaaacacgccatcatgatctgtaacaagaagttagagagc
ctgtgtaacatccatgagaacatcagagtgaagagtggtgcttgggccgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatatgccctcacctccggggatcatggtata
atccgtacattggatcttcccatctatgtgacaagagtcaggggcaacagtgtgtactgt
ctggatcgtgagtgcagaccacgagtgctcaacattgaccccacggagtaccgttttaaa
ctggctctggtcaatcgcaaatatgaggaggtccttcatatggtgcgtaatgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggctacccagaagtcgcgctgcac
tttgtcaaagatgagaagactcgttttagcctggctctggagtgtggaaacattgaggtg
gcgttggaggcagcgaaagccctggatgaccgaagctgctgggaacgtctcggcgaggct
gctcttctgcagggccatcaccaggtggtggagatgtgctaccagagaaccaagaacttc
gacaaactcaccttcctgtacctcatcactggcaacctgaccaagctcaggaagatgatg
aagatagctgagataagaaaggacatgagtggacactatcagggcgctctttacctgggt
gacatcagcgagcgtgtgcgaatcctcaagaactgtggacagaagtctctggcttacctg
actgctgccactcatgggatggatgaggaggctgaagccctgaaggagacctttgacctg
gaaaaagaaatggtgccagaagtggaccccaatgcccagctgttgcagccgccacctccc
atcaaccccttggacaccaactggcctctcctcacagtctctaagggcttcttcgaggga
gccattgctgccaaaggacgtgctggccagatggttgctgacctggacatggatgctaca
ggaggagaaggctggggagaagatgcagaacttcatctggatgaagatggattcatggat
gctcaagagggactgggagatgaagggaaagaggagggagaaggctgggatgttgaggaa
gatctggacctcccgccagaactggatataccttctgttggtggaggtggcgcggagggt
gacggtttctttgtgccgcccaccaagggcacaagccccacacagatgtggtgcaacaac
tctcagctggctgtggatcacataatggctggatcttttgagactgctatgaggttactg
catgaccaggttggtgtggttcagtttggaccctataagcaactgttcatgcaaaccctg
tcccgtgggcgcacctgttacctgggcctgccgtctctgccctgcttgcacagttacccc
ctgaggaactggaaggacagcggggctaaagggggtctgcctgcggtgggtctgcgtctc
tccgatcttatttcacgcctgcagcagtgctatcagctgaccacagcagggcgctttgaa
gatgctgttgatcgtttcagagccattctcctctctgtaccactgcttgtggtcgacaac
aaacaagagattgcagaggctcagcagcttatcactatctgtaaagagtatattattggc
ctcaccatggagaccgagaggaagaaacttcctaaagacactctcgatcagcagaagaga
ctttgtgagatggcagcatatttcacacactgcagtctgcaacctgtccacatggtgttg
gtgctgagaacagcactcaatcttttcttcaaactgcgtaacttcaagacagcagcgggt
ttcgctcgccgtctgcttgagttgggtcccaaaccagaagtagcacagcagacaagaaag
attcttgcagcatgtgagaaaagcctgacagatgcccaccaactgaactatgacccccac
aatcccttcgacatctgtccagcttctttcactcctctgtaccgcgggcggccggtagag
aaatgccccctgtctggagcctgctactaccccaaatacaaaggagaggtctgcagggtc
acacaggtaactgagattggtaaagatgtgatcgggttgcgtgtcagcccactgcagttc
cgctga

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