Carassius gibelio (silver crucian carp): 128031577
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Entry
128031577 CDS
T08819
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128031577
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128031577
Membrane trafficking [BR:
cgib04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128031577
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128031577
Exosomal proteins of bladder cancer cells
128031577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
128031577
NCBI-ProteinID:
XP_052475860
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All DBs
Position
A2:22450128..22463307
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AA seq
1221 aa
AA seq
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MLTKFETKSARVKGLSFHPKRPWILSSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCACVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTD
VRGISGVDLFGGSDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSSDANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDDRSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLTKLRKMM
KIAEIRKDMSGHYQGALYLGDISERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAT
GGEGWGEDAELHLDEDGFMDAQEGLGDEGKEEGEGWDVEEDLDLPPELDIPSVGGGGAEG
DGFFVPPTKGTSPTQMWCNNSQLAVDHIMAGSFETAMRLLHDQVGVVQFGPYKQLFMQTL
SRGRTCYLGLPSLPCLHSYPLRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAGRFE
DAVDRFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDTLDQQKR
LCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQTRK
ILAACEKSLTDAHQLNYDPHNPFDICPASFTPLYRGRPVEKCPLSGACYYPKYKGEVCRV
TQVTEIGKDVIGLRVSPLQFR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgagacaaagtcggcccgagtgaaagggctgagtttccacccaaaa
cggccatggattctctctagtttgcacaacggcgtcatccagctgtgggactatcgcatg
tgcaccctcatcgacaagtttgacgagcatgatggtccagtcagaggtattgacttccat
aagcagcagccactgttcgtgtcaggaggagatgactacaagatcaaggtgtggaactac
aagctgcgtcggtgtctcttcactcttcttggacatcttgactacattcgtaccacgttc
ttccaccacgagtatccctggatcctgagtgcctcagatgaccaaaccattcgtatttgg
aactggcagtccagaacatgtgcctgtgtgctgacggggcataatcactatgtgatgtgc
gctcagttccatccatctgaggacctggtggtgtcagctagcctggatcagaccgtgcgc
gtgtgggatatttccggtctgaggaagaagaacttgtctccgggtgctgtggacacggat
gtgcgtggcatctctggcgttgacctgtttgggggctctgatgcagtagtgaagcatgtt
ctggagggtcatgatcgaggtgtaaactgggcagccttccatcccagcatgcctctcatt
gtgtcaggagcagatgaccgccaggtcaagatctggaggatgaacgaatctaaagcgtgg
gagttggacacctgtcgagggcattacaacaatgtgtcctgtgcggtgttccaccctcgt
caggagctcattctgtctaactctgaggacaagagcatccgcgtgtgggatatgtccaag
aggacaggtgtccagacctttcgcagagatcacgaccgtttctgggtgctgggggctcac
cccaacctcaacctgtttgctgctggccatgacagtgggatgctggtgtttaaactggaa
agggaacgtccagcttacgctgtgtatggtaacatgctgtactatgtaaaggatcgcttc
ctgcgtcagctcgacttcaacagcagtaaggatacagccgtcatgcagctgcgcagtgga
tccaaattcccagtgttcagcatgtcctacaaccctgcagaaaatgctgtgctgttgtgc
actagagctactaaccttgaaaacagcacatatgatttatactccattcccagagagagt
gattcccagaatcctgatgctcctgagggaaagcgttcctctggtctcactgcggtttgg
gtggccaggaaccgttttgcagtacttgaccgcatgcactcactcctgattaagaatctg
aagaatgagattgtgaagaaggtccaggtaccaagctgtgaggagatcttctacgctgga
actgggtctctgctgctgcgtgatgctgatggagttactctgtttgatgtgcagcagaag
cgctccctcgctacggtcaaaatcgctaaagtcaaatatgtggtgtggagctccgatgcc
aaccatgtggccctgctggccaaacacgccatcatgatctgtaacaagaagttagagagc
ctgtgtaacatccatgagaacatcagagtgaagagtggtgcttgggccgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatatgccctcacctccggggatcatggtata
atccgtacattggatcttcccatctatgtgacaagagtcaggggcaacagtgtgtactgt
ctggatcgtgagtgcagaccacgagtgctcaacattgaccccacggagtaccgttttaaa
ctggctctggtcaatcgcaaatatgaggaggtccttcatatggtgcgtaatgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggctacccagaagtcgcgctgcac
tttgtcaaagatgagaagactcgttttagcctggctctggagtgtggaaacattgaggtg
gcgttggaggcagcgaaagccctggatgaccgaagctgctgggaacgtctcggcgaggct
gctcttctgcagggccatcaccaggtggtggagatgtgctaccagagaaccaagaacttc
gacaaactcaccttcctgtacctcatcactggcaacctgaccaagctcaggaagatgatg
aagatagctgagataagaaaggacatgagtggacactatcagggcgctctttacctgggt
gacatcagcgagcgtgtgcgaatcctcaagaactgtggacagaagtctctggcttacctg
actgctgccactcatgggatggatgaggaggctgaagccctgaaggagacctttgacctg
gaaaaagaaatggtgccagaagtggaccccaatgcccagctgttgcagccgccacctccc
atcaaccccttggacaccaactggcctctcctcacagtctctaagggcttcttcgaggga
gccattgctgccaaaggacgtgctggccagatggttgctgacctggacatggatgctaca
ggaggagaaggctggggagaagatgcagaacttcatctggatgaagatggattcatggat
gctcaagagggactgggagatgaagggaaagaggagggagaaggctgggatgttgaggaa
gatctggacctcccgccagaactggatataccttctgttggtggaggtggcgcggagggt
gacggtttctttgtgccgcccaccaagggcacaagccccacacagatgtggtgcaacaac
tctcagctggctgtggatcacataatggctggatcttttgagactgctatgaggttactg
catgaccaggttggtgtggttcagtttggaccctataagcaactgttcatgcaaaccctg
tcccgtgggcgcacctgttacctgggcctgccgtctctgccctgcttgcacagttacccc
ctgaggaactggaaggacagcggggctaaagggggtctgcctgcggtgggtctgcgtctc
tccgatcttatttcacgcctgcagcagtgctatcagctgaccacagcagggcgctttgaa
gatgctgttgatcgtttcagagccattctcctctctgtaccactgcttgtggtcgacaac
aaacaagagattgcagaggctcagcagcttatcactatctgtaaagagtatattattggc
ctcaccatggagaccgagaggaagaaacttcctaaagacactctcgatcagcagaagaga
ctttgtgagatggcagcatatttcacacactgcagtctgcaacctgtccacatggtgttg
gtgctgagaacagcactcaatcttttcttcaaactgcgtaacttcaagacagcagcgggt
ttcgctcgccgtctgcttgagttgggtcccaaaccagaagtagcacagcagacaagaaag
attcttgcagcatgtgagaaaagcctgacagatgcccaccaactgaactatgacccccac
aatcccttcgacatctgtccagcttctttcactcctctgtaccgcgggcggccggtagag
aaatgccccctgtctggagcctgctactaccccaaatacaaaggagaggtctgcagggtc
acacaggtaactgagattggtaaagatgtgatcgggttgcgtgtcagcccactgcagttc
cgctga
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