Carassius gibelio (silver crucian carp): 128031781
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Entry
128031781 CDS
T08819
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128031781
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128031781
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
128031781
NCBI-ProteinID:
XP_052476152
LinkDB
All DBs
Position
A17:complement(23565224..23832682)
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AA seq
979 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNLQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDTPWNLRIEGPPPNTSVKAIGSQRRRSPNTAA
AEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPSLLSPDNILER
SFFVRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVMAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNGNEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENFKSDGKGNQSSENSEDPESNSKKQ
MGQPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDNKEGRLGGLHIKVECYGDGEVE
DLQDSPSSCSSSSEEVEDEVEDIVKDCNSGGELSGPAMSKHQKRKKRRKKQKWDGSRQRL
RLSPSAAATPSPGSLDPTLGDQPPLLLPPSPTNSSVLKIKTEMSEPINFDNDSSIWNYPP
NREISCNESPYSMTKTHNTFPSPPHAGLQVSIPDSVLTPPGAEGGGGNRKPNFNGNSSNG
NNNSAPTSVSSATPGSLVPPSSSATADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEAL
QRLQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNILPNAHSAVN
FVDGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGAGLTQMPAANVFTTAEGLFSTLP
FPVYSNGIHNTQTLERKED
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggaggaatgccggctgcgtcaagagtcccgggagctactaacggaaacccg
caaaacctccaaggcttgacgtcttaccaacaaagcgagccatactgggagaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctgagaaaggaaaagtcacgtgacgccgctcgctcg
cgccgggggaaggagaactttgagttctatgagctggcaaagatgcttccgctccccggt
gccatcaccagccagctggacaaggcctccatcatccgcctcaccatcagctaccttaag
atgagggacttcgccaaccagggggacacgccgtggaacctgcgcatcgaaggaccgccg
cccaacacctcagtcaaagctatcggctcccagaggaggcggagccccaacaccgctgcc
gcagagatctttgagcctcacctcggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacagtgtcgatatacctg
gggctttcacaggtagagctgacgggcagcagtgtgtttgactacgttcatccgggcgat
catgtggagatggccgagcagctgggcatgaagcttccgccgggcagagggctgctgtct
cagggcggcggggccgaggacggggccagctctgcctcttcttcctctcactctgagaca
cctgagccagtggagtcgaacagccctagtcttctgtcgccggataacattctagaacgc
tccttcttcgtccgtatgaagtccacgctcaccaaaagaggcgtccacatcaagtcctcc
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacacacagt
cgttcggtacccaatcaaatcatgggcatggttgtgatggcacacgcacttcctccgcca
accatcaatgaggttcggatcgactgccagatgtttgttacacgggtcaacatggatctc
aacatcgtctactgtgaaaaccgaatcagtgactacatggacctgacacctgtcgacatc
gtagggaagagatgctatcacttcatccacgcagaggacgtggaaggcattcggcaaagc
catttagacctaatgaataaaggtcagtgtgtgacaaagtattaccgctggattcagaag
aatggaggttatatctggatccagtccagtgccactattgcaatcaacgccaagaatggc
aatgaaaaaaacatcatctgggtcaactacgtactcagtaatccagagtacaaagataca
cccatggatatcgcacagttgcctaacctgccagagaaagcatcagagtcctcagaaaca
tctgattctgaatccgactccaaggagaactctgaagacaatgaaaacttcaagtcagat
ggaaaagggaatcagtcttctgagaacagtgaagatccagagtcgaacagtaagaaacag
atgggccagccaccagagcaagagatgagacgacaggaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtctggaaccttctgactgtgaaactgacaacaag
gagggccgcctgggtggtttacacataaaggtggagtgttatggtgatggtgaggtggag
gatctacaggactcgccctcctcttgctcctcctcctcagaagaagtagaggatgaggtg
gaggatattgtgaaggactgcaacagtggaggagagctgagcggaccagcaatgagtaaa
caccagaagagaaagaagaggagaaaaaagcagaaatgggatggaagtcgacaacgtctc
cgtctgtctccctcggcggctgctacccccagccctggcagcctggaccccacccttgga
gaccagcctcccctcctgcttccaccctccccaaccaattcctctgtgctgaagatcaag
actgagatgtcagaacctataaactttgacaacgacagcagcatctggaactacccaccc
aaccgagagatctcctgcaacgagtctccctacagcatgacaaaaacccacaacaccttc
ccttctcccccgcacgccggcctgcaggtgtccatcccagactcagtcctcactccacct
ggtgccgagggtggaggaggcaacagaaagcccaacttcaatggcaacagtagcaacggc
aacaataacagtgcccccacctctgtgtccagcgcaactccgggcagcttggttcctcct
tccagttccgctactgctgacccgctctccccacctctgtcagcctcgccacgggacaag
cagcagggtacacccacctcctctggttccctgctctacaccagtgacctggaagccctg
cagaggttacaagcggggaacgtggtacttccactggtgcacagagtcacaggcacgctt
gctgccaccagcacagcatccccgcgagtctacaccactggaacgatccgatatgcccca
gcagacgtcagcttggccatgcagggcaacatcttgccaaatgctcacagcgctgtgaac
ttcgtggatgggcccggcttcggcatagaccctaagacgcccatggagatgctgtatcat
catgtgcaccggctcaacatgtccacccccttcgggggtgcggtcagcggagccgggctc
acacagatgccagctgcaaatgtcttcaccacagcagagggacttttctccacgcttccg
tttcccgtctacagcaatggcatccacaacacacagacactggagcgcaaggaggattga
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