Carassius gibelio (silver crucian carp): 128031793
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Entry
128031793 CDS
T08819
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128031793
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128031793
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
128031793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_VPS8
RAB3GAP2_N
Synaptobrevin
WD40_like
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
128031793
NCBI-ProteinID:
XP_052476186
LinkDB
All DBs
Position
A17:24550842..24589317
Genome browser
AA seq
1144 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSSSNAASGNRENDMIQETLQSEHFQLCKTVRHGFPYQPSS
MAFDPVQKILAIGTQSGALRLFGQAGVECYCQHESGSAVIQLEFLVNEGALVSALADDSI
HLWNLRQKLPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYVIM
WNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYSYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNIRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKT
TRAGDPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEP
YAVVVLLEKDLVLIDLAQIGYPIFENPYPLSIHESPVTCCEYFADCPAEVIPALYSVGSR
QKRQGFSKKEWPINGGNWGQGTLSFSEIIITGHADGSIKFWDASALMLQVLYKLKTAKVF
EKPRSKEEKSSTEIVDEDPFAIQILSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEVVQL
LEVRMPCELNEVESPECGGEQASAVTTPGTSSSPQTSLPQSHPSTSSNNSSDGLRDNVPC
LKVRSSPLKQSAGYQVELLIQLVWVSGEPPQQITSLAVNSAYGLVAFGSGDGLAVVDYLQ
KTLIVNVSTAELYGSTDPHHRQPHSPRKTRQPSAGLCDGNDASAAPEEKCKSPTTGSGSP
CNSDEDSKQKFIDKVKSKSRRISKTVANDFAKISRKINMIADQKDDARDNSFSRSRSSSV
TSIDRESREVISSFNFCDWLSKKSESVAVPSLWVGTSLGSMLAIALTVPSTPEQRMLQPV
GVSFCGPVVRLKGGILRMAQLDASGTLLPHVYESWYEPNAPEEEREQPRRRRPTSPSSSQ
ENPDCQYAVVCSEKQAKVLALPSQNCVYEHNITESSFVLRADVVTLTSGVGIACFCANGH
IMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQALYLTSPTEIQRITYIQETCDNLQ
EMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGEVSAGKASRSLAQHIPGPGGM
EGMKGAASGVVGELARARIALDERGQKLGELEERTAAMMASGESFSKHAHDIMLKYKDKK
WYQL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgctggacggcttgactgcggcgtcttcctcctcc
tcatcctccaatgccgcgtcgggaaacagggagaatgacatgattcaggagaccctgcag
tcagagcatttccagctctgcaagacagtgcgacatggctttccctatcaaccctcctcc
atggcttttgaccctgtgcagaaaattctggctattggcacacagagtggagccctgaga
ctatttggtcaagcaggagtggagtgttactgccagcatgagagcggatcggctgtcatc
cagctggagtttcttgtcaatgaaggggcgctggttagtgctttggcagatgacagtatt
catttgtggaatctgaggcaaaaacttccagccatccttcattctcttaaatttaatcgg
gagaggatcacgttttgccatttgccctttcagagtaaatggctgtacgtgggcacggaa
agagggaacattcacatcgtcaatgtggagtccttcaccctctcaggctatgtgatcatg
tggaacaaagccattgaactttcctcaaagactcaccctggacctgttgttcatatcagc
gataaccctatggacgaagggaaacttttaattggttttgagtgtggcatagttgtgctg
tgggacttgaaatcaaagaaagctgactatcggtacagctatgatgaggcgatccactct
gtggcttggcatcacgagggaaaacagtttgtgtgcagtcactcggatggcacacttacc
acatggaatatacgcgctcctgccaagcctgcccagatcattacgccacatggtaaacaa
cctaaggatggaaagaagccggagccttgcaaacccatcctgaaagtggagtacaaaact
accagggctggggacccattcatgatactgtgtggaggtttgtcatatgatacagtgggt
agacgagcctgtctgactgtgatgcatgggaaaagcactgcagtgctggagatggactac
cccatagtggatttccttacgctgtgtgaaaccccatatccaaatgatttccaggagcct
tatgcggttgttgtcctgctggagaaggatttggttctcattgatcttgcacaaattggg
tatccgatctttgagaatccttatcctctctccatccacgagtctccggtgacctgctgc
gaatattttgcggactgtccagctgaagtcattcctgcactctactcagtgggctcccga
cagaagagacaagggttcagtaagaaggaatggccgataaatggaggtaattggggccag
ggaacactaagtttctcagagataatcatcactgggcatgctgatggatcgatcaagttt
tgggatgcctcagcattaatgctgcaggttttgtataagctgaaaacagcgaaggtgttt
gagaagccccgcagtaaagaggagaaatccagcactgaaattgtggatgaagatccgttc
gccatccagattctgtcctggtgtccagagagccgtgtgctctgtgtggctggagtatcg
gctcatgtcatagtgtacaggttcagcaaacaggaagtcaccactgaagtggttcagctc
ctggaggtgcgtatgccttgtgagctgaatgaagtagagtctcctgagtgcggaggcgag
caggcgtcagctgtgaccaccccaggaacctcatccagccctcagaccagccttcctcag
tcccacccctccaccagcagcaacaactcatctgacggcctgcgagataacgtgccctgt
ctcaaggtcaggagttctcctctcaaacagtctgcggggtaccaggtggagctgctcatt
cagctggtgtgggtcagtggggagccgccacaacagatcactagcctggccgtcaactct
gcatatggcctagttgcttttggcagtggtgacggacttgcagtggttgattaccttcag
aaaactctcattgtgaacgtgagcaccgctgagttgtatggctcaacagatcctcaccac
agacaaccacactcaccccgcaaaaccagacagccctcggcaggtctttgtgatggtaat
gatgcgtcagcagctccagaggagaaatgcaaatcaccaactacaggctccggttcacca
tgcaattctgatgaagacagcaaacaaaagttcattgacaaggtgaagtccaaaagcagg
aggatatccaagactgttgccaatgactttgctaagatatcccggaaaattaacatgatt
gctgatcagaaagatgacgccagggacaactctttcagccgctcacgcagctccagtgtg
accagcatcgacagagagtcacgtgaggtcatttcctccttcaatttttgtgattggctg
tctaagaagagtgagagtgtggccgtgcccagcctgtgggttggcacctcattgggcagc
atgctggccatcgccctaactgtgccctccacaccagagcagaggatgctacagcctgtg
ggcgtctctttctgtggtccagtagtgcgcttgaagggaggcattttgcgcatggcccag
ctggatgccagtgggacacttctgccccatgtttatgagtcttggtatgagcccaacgct
cctgaggaggagagagaacagccacggagacgccggcccacctcaccttcttcatctcag
gagaacccggactgtcagtatgccgtggtctgctcagagaaacaggctaaggtgctggcg
ctgccctcccaaaactgtgtctatgaacacaacatcacagagtcctccttcgtacttcga
gccgacgtggtgacattgacctcaggggtcggcatcgcctgtttctgtgccaatggccac
attatgaccctcagtttacccagtctgcgtccactgctagatgttaactaccttcccctg
acggacatgaggatagccagaaccttctgtttctcaaaccaaggccaagccctgtacctc
acatcgcccactgagatccaaagaattacctatatccaggaaacctgtgataacctgcag
gagatgcttggagagctgtttactccggtggagacaccagaggctccgaaccgaggcttc
ttcaagggcttatttggaggcggggctcagtctttagacagagaggacctgttcggagag
gtgtctgctggtaaagcttcacgcagcctggcgcagcacatcccgggtccaggtggtatg
gagggcatgaagggggctgcgtctggtgtggtgggagaactggcacgggcgaggatagct
ctggacgagagaggacagaaactaggcgagctggaggagaggacagcagccatgatggcc
agcggagaatccttctctaaacacgcgcatgatataatgctgaaatacaaggacaagaaa
tggtaccagctctga
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