KEGG   Colletes gigas: 122394759
Entry
122394759         CDS       T07492                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
cgig  Colletes gigas
Pathway
cgig04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122394759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgig04121]
    122394759
Enzymes [BR:cgig01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122394759
Ubiquitin system [BR:cgig04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122394759
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122394759
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 EIF3I zf-C3HC4_2 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_DCAF4 zf-C3HC4 Beta-prop_WDR90_POC16_2nd zf-RING_2 zf-RING_UBOX WD40_like Beta-prop_WDR35_TULP_N Beta-prop_HPS5 zf-C3HC4_3 Beta-prop_DCAF12 Beta-prop_CAF1B_HIR1 RING_XB3-XBAT31 zf-RING_5 Beta-prop_Vps41 WD40_RFWD3 zf-C3HC4_4 Beta-prop_IFT140_1st WDR90_beta-prop_4th zf-rbx1 Beta-prop_SPT8 WDR54 Rx_N zf-RING_10 Polyhedrin U-box PUMA_CC Sina_RING zf-ANAPC11 DUF1664
Other DBs
NCBI-GeneID: 122394759
NCBI-ProteinID: XP_043247807
LinkDB
Position
Unknown
AA seq 687 aa
MSAIGDSNLGNDSAAGSSGGVGECSSRISKQHQSTNVLHRISSTLEDKNNDYLCPICFEV
IDEAHITRCGHTFCYRCIVKSLEANGRCPKCSYTLTQQDIFPNFLLHELISKYKTRIKGL
AELGSSYTVDGRHRVIGTDISLPPYDGLRDIVAAESANLTLPDVNVMLEVLTQRKHLLEA
ETCAAQNKLLHEFLTHLLQQKEEQKKQLQKEIALIKKDMEEVENILRDVQSKCPRIEDLK
KSSENDTAQVWAIRREMIGLIDIIDSNMVKPNEKTVATSGNDTFGNPSGSQKQIVYTAGS
TLAVRRKRMHAHFDDFVQCYFDFRAKELLLGHKPQGQSDTWHGTSSGLDVFRENLVKFSK
YNSLRPLATLNYSSDIFNNSTIVSSIEFDKDNEFFAIAGVTKRIKVFDYCAVIRDTVDIH
YPCVEMLSSSKISCVSWNSFHKGMLASSDYEGTVTVWDAATGQRTKAFQEHEKRCWSVDF
NDVDTRLIASGSDDARVKLWSLNNDHSVASLEAKANVCCVKFNPRSSCHLAFGSADHCVH
YYDLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINNPHCLRSFVGHVN
EKNFVGLATDGDYVACGSENNALYVYYKGLSKQLFSYKFDGVRSILEIQERREEDLNEFV
SAVCWRQMSNVVVAANSQGIIKILELV
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgtcagctatcggtgatagtaacttgggaaatgatagcgctgctggaagtagtggggga
gtgggtgaatgtagtagtcgaataagtaaacaacaccaatcgacaaatgttctccatagg
attagcagtacactcgaagataaaaataatgattatctctgtcctatttgttttgaggta
atcgacgaagcccatatcacgcgttgcggtcacacgttctgttatcgttgtattgtaaaa
tctttggaagctaacgggcgttgtccaaaatgtagctacacgttaacgcaacaggatata
ttcccaaactttttgttgcacgaactaatttcaaaatacaaaactagaattaaaggtctc
gctgaattagggtcctcgtacacggtcgatggtagacatagagttataggcacagatata
tctctaccgccgtacgatggattaagagatatcgtagccgcagaaagtgctaatctcact
ttgccggacgtaaatgtaatgttagaggtattaacccaaagaaaacatttgctcgaggcg
gaaacatgtgcggcacaaaacaaattgctgcacgaatttttaacgcatttattgcaacag
aaagaagaacaaaagaagcagttacaaaaggagatagcattaattaaaaaggatatggaa
gaggttgaaaatatattaagggacgttcagagcaaatgtcctagaatagaagatttgaag
aaatcaagcgaaaatgatactgcgcaagtgtgggctattagaagagagatgataggcctt
atagacataatagattcaaatatggtgaaaccaaatgagaaaactgttgcaacatctgga
aacgatacgtttggtaatccttcggggagccaaaaacaaattgtatacacggctggatcg
accttggctgtacgtaggaagagaatgcatgctcactttgacgattttgtgcaatgttat
ttcgatttccgtgctaaagaattacttcttggacacaagcctcaaggtcagagcgacaca
tggcacggcacgagctcagggcttgatgtttttagagaaaatcttgtgaaattttcaaaa
tacaattcgttacgtccattggcaactttaaactattcgtcggatatttttaataattcc
actattgtctcgagcatagaatttgataaggataatgaattctttgcaatagctggggtt
acaaagcgtatcaaagtattcgactattgtgccgtaataagggatacggtggacattcac
tatccctgtgtagaaatgttatccagctctaaaatatcgtgtgtatcatggaattccttt
cacaaaggaatgttagcgtcgtccgattacgaagggactgtgacagtgtgggacgctgca
actggtcaaagaacaaaagcgtttcaagaacatgaaaagagatgctggtccgtcgacttc
aacgatgtagacactaggcttatagcatcaggttcggacgatgctcgagtcaaattatgg
tccctgaacaatgatcattccgttgcttcattagaagcgaaagctaatgtatgttgcgta
aaatttaatccgcgtagttcgtgccatttggcatttggatcagctgatcattgcgtccac
tattatgatctacgtaatatgaaggaagcattgtgcatatttaaaggccaccgtaaagct
gtttcgtatgttaagtttattaacaaagaggaaatagtatccgcaagcaccgattcgcag
ttaaaaatgtggaacattaacaatccgcattgtttgcgctcatttgttggacacgtaaat
gagaagaactttgtaggtctcgccaccgatggcgattacgtggcatgcggatcggaaaat
aatgcactctatgtatattacaaaggactatcgaaacaattattctcttataaatttgat
ggtgttcgaagcatattagagatacaagaacgaagagaagaggatctgaatgaattcgta
tccgcagtttgttggagacaaatgtctaatgttgtggtggctgctaattcccaaggaatt
attaaaatattagaacttgtttga

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