Colletes gigas: 122394833
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Entry
122394833 CDS
T07492
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cgig
Colletes gigas
Pathway
cgig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122394833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122394833
03036 Chromosome and associated proteins [BR:
cgig03036
]
122394833
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122394833
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122394833
PBAF complex
122394833
GBAF(ncBAF) complex
122394833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
122394833
NCBI-ProteinID:
XP_043247911
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MLALGPKKDGGPNTKFFESQEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLIVQLLQ
FQEDNLGKNVSKPPMTRLPVKCFLDFKPGGGLCHILATAYRFKQEQGWRRFDFPVGKSGS
RMDRTVEMLMAAERALVQNRCLTIPSIYVRADVDKSTAAKVKEAIRRHQGTIAENEADAT
HIIYPPADPMEEEYARPCMRRERSVLLHWYYFPDSYDSWTTLDLPWDFPEGTLTTANMKS
IYKVSATWALDLDQYNEWMNEEDYEIDESGQKKIHKFRLSVEDLMAQPSHPPPSAKKPKR
KRSPSPPPKQGKRKSGRGPSGVQSASSTSSLTTPKKSRGGGEEEDDLTQGMEDPPAEPRI
VEVVATPTNPPVTGQGTTPTSGTTLTTTGSKKQDNELQPLKSGNMADLDEPMEGDKGSSQ
GTQDREERDVSKERGEGNKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFF
NGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLI
NYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKALLDLEKKSNIT
SGIGVEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKD
DWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTV
AFLASVVDPRVAASAAKAAMEEFAAIKDQVPATLLDQHLRNVQASANSDGKFDPAAGLAQ
SGIAGTGPPEPPDDTATPSTTGSVPTTAATSPHSATSTPMETKKEEQDNKPKESEVDQTQ
LDITKKEDEMKEAEEDTKAAVDAEAIEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLE
QLKAAEFRARQQAHQRLAQEQQQQQQNQHPPWQPTAQQQQQQQQPPSPQAQAQQPPPHTP
PQQA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgttaggacctaaaaaggacggtggacccaatacgaaatttttcgagtcccag
gaaattcttacacagctcgatggagtaaaacagtggctattgaaaaactgcaagaagtat
gtacaaacggaccctcccaccaataaaagtttagctactttgatagtacaattattacaa
tttcaagaagataatttaggaaaaaatgtttcaaagccaccgatgacaaggcttccagtg
aagtgtttcttggattttaaaccaggaggtggattatgtcatattcttgctacagcatat
cgttttaagcaagaacaaggatggcgtaggtttgattttccagtcgggaagtcaggatcc
cgtatggatcggactgtggaaatgttgatggcagctgagcgtgctttagtgcagaatagg
tgtctgaccataccaagtatatacgtaagagccgacgtagacaagtcaacagctgccaaa
gtaaaagaagcaatacgaagacatcagggcactattgccgaaaatgaagcggatgctacg
cacataatttaccctccggcagatcctatggaagaagagtacgctcggccttgtatgagg
cgcgagagatccgttcttctccattggtactattttccggacagctatgattcttggact
actttagatcttccttgggatttcccagaaggtacacttactaccgcaaacatgaaatca
atatacaaagtatctgcgacatgggcattagatttagatcagtacaatgagtggatgaac
gaggaagactatgagatagatgaaagtggtcaaaagaaaatacacaagtttcgactttcg
gtagaagatttaatggctcaaccgtctcatccgccaccctctgcaaagaaaccaaaacga
aaacgatccccgagcccaccaccgaaacagggaaaacgtaaaagcggaagggggccatcg
ggtgttcaaagtgcttcgtctacgtcatcgttgacgactccaaaaaaatcacgcggtggc
ggtgaagaagaagacgatcttactcaaggaatggaagacccaccagcggaacctcggatt
gtcgaagtagttgctactcctacaaacccaccggttacaggtcaaggtaccactccaacg
agtggtaccactttgacaacgacaggaagtaaaaaacaagataacgaacttcagccattg
aaatctggtaacatggcagacttggacgaaccgatggaaggtgacaaaggtagctctcaa
gggactcaagatagagaggaacgcgacgttagtaaagaaagaggagaaggtaacaaaggg
gacgaaccagaagataatgttacagagcaaacgcatcatatcgttgtccccagttattcc
gcctggttcgattacaattcgatccatactattgaaaagagagctttatcagagtttttt
aatggcaaaaacaaatccaaaacgccagaaatttatctcgcgtacagaaactttatgatc
gatacttatagattaaatcccacggaatatattacatcaacggcctgcagacgtaatttg
gcaggtgatgtgtgcgcgatcatgcgcgtgcatgcatttttggaacaatggggactaatt
aattaccaggtagatgcagaatcgagacccacgcctatggggcctcctccgacatcgcat
tttcatgtattatcagatactccgtctggtttggccccggttaatccaaatccgccgaaa
acgccgcagccatcggctgcaaaagctttgctcgatttggagaaaaaatcgaacataacg
agtggaattggagtggaggaaaaggcttcggcgggagcgatggcaaactttggattgaaa
atagatcaatattcaagaaaaccggcggtattgaagaacaaacaagctgctggcgctact
cgcgattggacggaacaagagacacttttactgttagaaggattagaattgcacaaagat
gactggaacaaagtttgcgaacacgttggctcgagaacgcaagacgaatgtattttgcac
tttttacggcttccaatagaggacccatatttagaagaaggagggccagagggtctgggt
ccattggcttatcaaccggtacccttttcgaaagctggcaatcctgtcatgagtacagtt
gcatttttggcctcggttgttgatcccagagttgcggcaagtgccgccaaagctgctatg
gaagaattcgcagccatcaaggaccaagtaccggctactttgctagaccaacatttgaga
aacgttcaagccagcgctaattccgatggcaagtttgatccagctgcaggattagcgcaa
tctggtatagctggtacaggtccgcccgaacctccagacgacacagcaacgccttcgacg
actggaagtgttccaacaacggcggctacgtcaccgcattcggctacatcgacccccatg
gaaacgaagaaagaggagcaagataataaacctaaggaatccgaagttgaccaaactcag
ttagatattacaaagaaggaagatgaaatgaaagaggcagaagaggatacgaaagctgct
gtggacgctgaagctatagaagcgaaagaaaagaaggacaaggtggtgcgtgacgctcaa
ctccagtccgcagctgctgcggcattagcagcggccgccgttaaggcaaaacacttggca
gccgtagaggaacgtaaaattaagtccttggtggcgctactcgttgaaacgcaaatgaaa
aagctggaaattaaattacgtcatttcgaagaattggagactactatggaacgggaacgc
gaaggtttggagtaccaaagacagcagttgatcaccgaaaggcaacagtttcatttggaa
caattgaaggccgcggagtttagagcgaggcaacaagcacaccagcgtctagcccaggaa
caacagcaacaacaacaaaatcagcatccgccttggcaaccaaccgcacaacaacagcag
caacagcaacagccaccaagtccgcaagcacaggcccaacaaccaccgccgcatacgcca
ccgcaacaggcataa
DBGET
integrated database retrieval system