Colletes gigas: 122394953
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Entry
122394953 CDS
T07492
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cgig
Colletes gigas
Pathway
cgig03022
Basal transcription factors
cgig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122394953
09124 Replication and repair
03420 Nucleotide excision repair
122394953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122394953
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122394953
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122394953
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122394953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
122394953
NCBI-ProteinID:
XP_043248093
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MADEEEEKEYRWETGYEKTWEALKEDDHGLLEASIADIIHNAKRKRQMDKKIGARLGMMR
HVYIILDASEAMSNQDLKPTRFLCSLKLLEDFVEEFFYQNPISQLGIILTRNKRAEKISE
LAGNSKKHVKEIRGMQQIQPAGEPSLQNSLELALKSLRLLPSHASKEILVIIGALTTCDP
RDINETIQNMKSDCVRCSVIGLAAELYICKRMATATGGEHGVALDDKHYKEQLNMHIDPP
PAATRLDAALVKMGFPHHALHSSTTDTCMAVCMCHAESADESVKLTSTGYLCPQCLSKHC
ELPVECRACGLTLVSAPHLARSYHYLFPVEPFREVPFTGACSTCYGCQKIITQKDKKVYI
CNKCNQTFCLDCEIFIHESLHTCPGCATNPDTYQRSMNRT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaagaagagaaggaataccggtgggagactggttatgaaaaaacatgg
gaagcgcttaaggaagatgaccatggattactggaagcatctatcgctgatattattcac
aatgctaagaggaaacgtcagatggataaaaaaattggtgccagattgggaatgatgaga
catgtctatataatccttgatgcttcggaagcaatgtccaatcaggatttaaaaccaact
cgttttttatgttcattgaagcttttggaggattttgtcgaagaatttttttatcagaac
cccataagccagttgggaataattcttacaagaaataaaagagcagaaaaaataagcgaa
ttggcgggaaattctaagaaacacgtcaaggaaataagaggcatgcaacaaattcagcca
gctggcgaaccgtcgttacagaattcactggagctagctttgaagtctttacggctttta
ccgtcgcacgccagtaaagaaatacttgtaatcataggagcactcacgacgtgcgatcca
agagatatcaatgaaactatacaaaacatgaaatcagactgtgtaaggtgtagcgtgata
ggattggccgctgaattgtacatttgcaaaagaatggcgacggcaactggcggcgaacat
ggcgttgcgcttgatgataaacattacaaagagcaattgaacatgcacatagatccaccg
ccagccgcaacgagattggacgctgctcttgtaaaaatgggcttcccgcatcatgctttg
cattcttccacgaccgacacgtgtatggcagtgtgcatgtgtcatgcggaaagcgcagac
gagtctgttaaacttacgagcacaggatatctttgtcctcagtgtctaagtaaacattgc
gagcttcccgtagaatgtagagcgtgtggacttactttggtatctgctcctcacttggct
cgttcgtatcattatttattccctgttgagccttttagagaagtaccatttactggggct
tgttcaacttgttatggttgccaaaaaattatcacgcaaaaggataaaaaggtatacatt
tgcaacaaatgtaatcaaacattttgcttagactgtgaaatattcatccacgaatctcta
cacacgtgtccgggctgtgctacaaatccagatacatatcaaagatccatgaacagaact
taa
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