Colletes gigas: 122395092
Help
Entry
122395092 CDS
T07492
Name
(RefSeq) nuclear pore complex protein Nup154 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122395092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122395092
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122395092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
WD40_WDHD1_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
122395092
NCBI-ProteinID:
XP_043248348
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MTLTEMEPLKIHLDALEMAGKVVDAHITADSNFPSLINLMRYNVQGGPTVSGLDDHDYPN
LNGMSLCFSNINQMKLHSKISLPSEVMEHFHHMQCHCMMGLFTEISKAWLTIDSDIYVWS
YENETDVAYFDGLNETIISVGLVKPKPEVFQSYVKYLLILTTTVEVTILGVTLTENSEGT
SPEMQLVPEPIFTVTTDGIGITTIANTSSGRIFLGGRNGALYEIYYQAESNWFGKRCKKI
NHSEGPLSFLVPSFVTIALSEEEAIIQISVDDSRNILYTLGDKGTVAVWDIDHEGASKVA
SLSQSCLVQNAVHVVKTLDSNNFRPLVSISAITESESVHLNLVVVAATGTRFYFSCTSVA
NPTTRPQGLQLIHVRLPPGYAANATVMRPRKVQMAHYRKGTLILVCGGDTETALCLSNDA
YPFTNYLAETQSPLSLDSPVWAMSEILVEPAIRIEKQSSSQGEPPLLVRQHMEAPRKFIF
LTSQGAIIFVQVRPMDILKQLLLEQRGPDTEAVRAYFQSQSLEQACATCLILATLENSQN
AELAEWATRAFFLHGSQRMTGIGPGIDTHNTFANINTDIRTSTPRVPNYDLRFQGFRSRT
SVGPNTDIPQQQFSAKHNGLYLYVGRILRPIWNMRCIKQEVVNNKTQIFSTISAKQVTWI
LGLLQALRSFLNRNTHITKQLNATRNINDGFETTVTSHFQEPMVEERNSLAALKIFITHA
CEVLELWKILCENHLNNIINCLSKDQINQFFTATFRDLILIGHEISSLLIIHLIDSYLGD
NASVDVVSQRLREVCPNLYRSEDAVCSKANEIILKAKSCMNSEEKECYLQSALKLCKEVA
PRLNLSAVCQQFIACQFYSGVLELCLTCAERVDPNNAALHYYKNNEPNEDQEGGFAYMKR
LEIYKEFITLLDHLYNQSISNPLTPTIPSKPGPPLQNVPTMPVTPAKEILHDIINDALHS
PCEMLHASVYAWMIERRLHGELVALAAPSLEAYLTRLNAPDLLWQFYERNKNHAAAAKIL
DSLATKESNIQLSQRVEYLARAVVCMRSDQAGYAPYLGIFLRELEDKVEVARIQQQILDT
ICNQHMADRLSEDVFRALNNSLLDITKLYEKYADPLQLWECKLAIIHCSGHQDAMLIQEI
WTNIINNELKDASTAEDRMAILMSKIISLGQEYSGSPHCFPVDFLIKQLEIKACKLNVSN
DRIISGFLQLGVSVEDLLDIYKMIGKDTRTWLNEGNEFHLIESTADLVIYFVSHSNVTNN
FIRRKIITKSQDVISKCLTTLYNKPHGQALITKLRSIQSVLNRM
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgactctcacggagatggaaccactcaaaatacatttagatgctttggaaatggcaggg
aaagtagtagatgcacacattactgcagatagcaattttccttctttaattaatcttatg
cgatacaacgtacaaggtgggccaaccgttagcggtctcgacgatcatgattatcccaat
ttaaatggaatgtcattatgtttctcaaatataaatcaaatgaagctgcacagtaaaatt
tctttaccttctgaagtaatggaacactttcaccatatgcaatgccattgtatgatgggc
ctttttacagaaatttcaaaagcatggcttacgatcgacagtgatatatatgtttggtcg
tacgaaaacgagaccgacgttgcatattttgatggcttaaacgaaactatcataagcgta
ggtttggtaaaacccaaacctgaggtattccaaagctatgtgaaatatttactgatcctc
acaactacggttgaagtaactattcttggagtaacattaacagaaaatagtgaaggtact
tcgccagaaatgcagctagtccctgaaccaattttcacagtcaccacagatggtattggt
attacaacaatagcaaatactagtagcgggagaattttccttggtggtagaaatggcgcc
ctttatgaaatatattatcaggcagaaagtaattggtttgggaaacgttgcaaaaagata
aatcattcggaaggcccgttgtcgttcttagtaccatcattcgtcactatagcattgtcg
gaagaagaagcaataatacaaatttcagtagacgattcacgtaatattttatatactctc
ggtgataaaggaacagtcgctgtttgggatattgatcacgagggtgcgtctaaagtcgca
tctttatcgcaatcttgtttagtacaaaatgctgttcatgttgttaaaactctcgatagc
aataacttccgaccattggtgagcatatctgctattacagaatccgaatcagtgcattta
aacttggttgtagttgcagctactggaacacgtttttacttcagttgtacttcggttgct
aatccaacgactagaccccaaggtcttcaattaatacatgttagattaccaccaggatat
gctgctaatgccactgtaatgagaccaagaaaagtacaaatggcacattacaggaaagga
acgttaattctcgtttgcggtggagacacggaaacagctttatgtttaagtaacgatgct
tatccatttacgaattatttagctgaaactcaaagtcctttatccctcgatagtccagta
tgggctatgtcagagattctcgtagaaccagctatacgcattgaaaaacaaagcagttca
caaggagagcctcctcttcttgttagacaacatatggaagctcctcgaaaatttatattt
ttaacgtctcagggtgccataatttttgtacaagttcgtccaatggacattttgaaacaa
cttcttttggaacaacgtggacccgatacggaagctgttcgcgcatacttccaatcacaa
tctttagaacaggcgtgtgcgacctgtcttattttggccacgcttgaaaattctcaaaat
gctgagttggcagaatgggcaacaagggcattctttttacacggtagtcaacgaatgacg
ggcattgggcctggaatagatacgcataatacctttgctaatataaatacagatatacgc
acatcaacaccaagagttcccaactacgatttaaggttccaaggttttcgatcacgcact
tcggtaggacctaatacagatatccctcagcaacagttctcagcaaaacacaatggttta
tatctatacgtaggaagaatactccgaccgatatggaatatgcgatgtattaaacaagaa
gtcgtaaataataaaactcaaatcttcagtactatttcagcaaaacaagttacttggatt
ttaggactcttacaagctttaagatcatttctcaataggaatactcatattactaaacaa
ctcaacgctactagaaatataaacgacgggttcgaaacaaccgtaactagtcatttccaa
gaaccaatggtcgaggaaagaaattctttagcagctttaaaaatcttcattactcacgcc
tgtgaagtgttggaactttggaaaattttatgcgaaaatcatttgaataatattataaat
tgtctatcgaaggatcaaattaatcaattttttacagctacatttagagatttgatttta
attggtcatgaaatttcttcgttactaatcattcatcttatagatagctatcttggggat
aatgcgtctgtcgatgtcgttagtcaaagattgagagaagtttgtccgaatttgtataga
agcgaagatgctgtttgttctaaggctaacgaaataattttaaaagcaaaaagttgtatg
aactcggaagaaaaagaatgttatttgcaatctgctttaaagctttgcaaagaagttgct
cccagattgaatttgagcgcagtgtgtcaacaattcattgcatgccaattttattcgggt
gtactcgagttgtgtctcacctgtgctgaaagagtagatcctaataatgccgcgttgcat
tattacaaaaacaacgaacccaacgaagatcaagaaggtggatttgcttacatgaaaaga
ttggaaatttataaagaattcatcacgctactggatcatctctataatcagagtatttct
aatccattaacacccactataccaagcaaacctggacctccgcttcaaaatgttccaacc
atgcccgtcacaccagcaaaagaaatattgcacgacatcataaatgatgcattgcattct
ccgtgtgagatgcttcatgcttcggtgtatgcttggatgatagaacgaagacttcacggc
gaacttgttgctctcgcagcaccgtctttagaagcttatcttacgcgcttaaatgcaccg
gatttactttggcagttctatgaaagaaataagaatcatgctgctgctgccaaaattttg
gattctctggcgaccaaagaatcaaatatacaattatcgcagagggttgaatatttagcc
agagctgtggtttgtatgcgaagcgatcaagctggatacgctccatacctaggaattttc
ttacgcgaattagaagacaaagtagaagtagctagaatacaacaacagatattagacaca
atttgcaatcaacacatggccgatcgacttagcgaagatgtatttagagcattgaataat
tcgttgcttgatattacgaagttatacgagaagtatgcagaccctctacaattatgggaa
tgcaaattagctataattcactgttccggtcaccaggatgcaatgttgatccaagaaatt
tggactaatattattaacaatgaattaaaagatgcatccactgcggaagatagaatggct
attttaatgagcaaaattatatcccttgggcaggagtattcgggttctccacactgtttc
ccagttgattttctaataaagcaattagaaataaaggcatgtaaattaaacgtatcgaat
gatagaattatatccggatttctacaattaggtgtttcagtggaagacctgttagatatt
tataaaatgattggtaaagacactcgaacatggttaaacgaaggaaatgaatttcacttg
atagagtcaacggcagatttggttatttatttcgtatctcattcaaatgtcactaacaac
tttatcagacgaaagataatcaccaaaagtcaagatgtaatttccaagtgtttaacaacg
ctatacaacaaaccccatggacaagcattgataacaaaacttaggtcaattcagagcgtt
ttaaatcgtatgtaa
DBGET
integrated database retrieval system
