Colletes gigas: 122395372
Help
Entry
122395372 CDS
T07492
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122395372
09123 Folding, sorting and degradation
03018 RNA degradation
122395372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122395372
03041 Spliceosome [BR:
cgig03041
]
122395372
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122395372
mRNA degradation factors
5'-3' decay
Lsm complex
122395372
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122395372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
122395372
NCBI-ProteinID:
XP_043248806
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MATSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctgtcagcacaaatccgtcaactctgttgcctctagaattggttgacaaa
tgcatcggttcacggatacacatcattatgaaaaacgacaaagaaattgtcggcactttg
ttaggtttcgatgactttgtgaatatgttactcgaagatgtgacggaaagcgaagcaaca
cccgaaggacgaagagtcaccaaactcgatcaaattttgcttaatggaagcaatatcacg
atgcttgtacctggtggagaaatgcctgatacataa
DBGET
integrated database retrieval system
