Colletes gigas: 122395396
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Entry
122395396 CDS
T07492
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgig03009
]
122395396
Enzymes [BR:
cgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122395396
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
90S particles
Helicases
122395396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Flavi_DEAD
HEM4
AAA_19
Motif
Other DBs
NCBI-GeneID:
122395396
NCBI-ProteinID:
XP_043248865
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MDAYELFQKLSSGVKFDKKRFHVEAEKFQLVKKQTENGFQHKKKINTLDNVNSLMLPAKR
KYDEINEETENTNRLILLDGISVPKDGSKIKSKKAKESLNEEKQLKLKQEKINQYRNQYH
ISVTGGRVPDPILQFTDLSTTYSVPERLLNNLVECDYVHPTPIQMQAMPVMLQGRQILAC
APTGSGKTAAFLLPIIYHLSEAQKKGFRAIILSPTRELSKQTYRECVRLSEGYNLRVHII
SKINQALSKYGPKSSQKFDILITTPKRIIFLLNQDPPAVSLTNVEWLVVDEADKLFEDGT
RCFRDQLGEITKACTNKDLRVAMFSATNTPVVTKWCRHNLKGLITVTIGHRNAATNLVEQ
ELLFVGTERGKLVAIRNIIQKGVLPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTQ
TQRDNVVRCFREGKIWVLVCTELMARGIDFKGVNLVINYDFPPSAISYVHRIGRTGRAGH
RGKAITFFTEEDTTNLRSIAAVMRESGCNVPEYMLTMKKHTKKERRKLERRAPTRETIST
IPKFNRVHNKGKIRKPIKKTPDIK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtatgaactgtttcaaaaactttctagtggtgtaaaattcgacaaaaagcgt
tttcatgtcgaagcagaaaaatttcagcttgtaaaaaaacagactgaaaatgggttccag
cataaaaagaaaatcaataccttggataacgtaaattctttaatgttgcccgcaaaaaga
aaatatgacgaaattaatgaagaaacagaaaacaccaataggttaatactgctcgatgga
atatctgttcctaaagatggtagtaaaataaagtctaagaaagctaaagaatctttgaac
gaagagaaacaattaaagctgaaacaagaaaagattaatcaataccgtaatcaatatcat
ataagtgtgacaggaggtcgtgtgcctgatccaatattacaatttacggatttgtctaca
acttactctgtacctgaaagattactaaacaatcttgtagaatgcgattatgtacatcct
acgccaattcaaatgcaagctatgcctgttatgttacaaggtagacaaatattagcatgt
gctccaacaggatctggcaaaacagctgcttttttgttgccaataatataccatttaagt
gaagcacagaagaaaggattcagagctattattttaagtcctacgagagaattatctaaa
caaacatacagagaatgtgtacgtcttagcgaaggctataatttgagagttcatattata
agtaaaattaaccaagcattaagcaaatatgggcctaaaagttcacaaaaatttgatata
ctaattactacaccgaaaagaataatatttcttttaaatcaggatccaccggctgtgtct
ttaacaaatgttgaatggctggttgtggatgaggcagataaactttttgaagatggaacg
cggtgtttcagagatcagttgggagaaattacaaaagcgtgcacaaacaaagatttacgc
gtggcaatgtttagtgcaaccaatactcccgtagtgacaaaatggtgcagacataatttg
aagggtcttataacagttaccattggtcatagaaatgctgcaaccaatttagtagaacag
gaacttttatttgttggaacagaaagagggaaactcgtagcgattagaaatattattcaa
aaaggagtattgccacctgtgcttgtgtttgtacaaagtaaagaaagggcacaagaatta
tttaacgaacttatatatgatggaattaacgtcgatgttattcacgctgatagaacacag
acacagcgagataacgttgttcgttgctttagagaaggaaagatatgggttttggtatgt
acagaattaatggcaagaggtattgactttaagggtgtaaatcttgtcattaattatgat
ttcccgccatctgctatttcttacgttcatagaattgggcgtaccgggagagctggacat
agaggaaaagcgattactttttttaccgaggaagatactacaaacttgagaagtatagct
gccgtaatgcgtgaatctgggtgcaatgttcctgagtacatgttaactatgaagaagcat
acaaaaaaggaaagacgaaaacttgaacgtagagctcctaccagagaaacaatatctaca
ataccaaaatttaatcgggtacataataaaggaaaaataaggaaaccaataaaaaaaact
cccgatattaaatga
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