Colletes gigas: 122395410
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Entry
122395410 CDS
T07492
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122395410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122395410
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122395410
mRNA degradation factors
3'-5' decay
Pan complex
122395410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
122395410
NCBI-ProteinID:
XP_043248890
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MDPSMFVAYTTQTNGVPLESKLATYMNRQSPGVTLSTTAITKHLSNLSLDSQKKVTASPE
FVPGRSLTSSNSSSPNLFNNSYHSQENVGGTTYFYLGNAATDTVGAEEGTETIVNVGAGQ
VGYVYPGTPAHLQPVKPVKPPSSNSSSAPSTPPPQATPSFFVSESLRIDILQKNALTLAQ
PDVVRFPDLPNEVDNYHELCPLEPIHKPASTMLGYQTSTYKATSIKSGTRYCLRRIHDFR
LANTKCMVLVDMWKRLSHTNLVQLREVFTTKAFGDHSMVFVYDYHPGSETLLNKHFSATE
LNGYTDPFSSDPNAPRPYSHTKNTILRQQHSSMLPESVIWSYIIQLTAALRVIHAAGLAY
RCLDPTKVLLTSRTRLRLSCVAIPDVVTFDGNAANPLSLIPHYQQEDLIALGKLVLALAC
RSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARRSVTDLMPMIGARFYTQLDAA
LLRSDVLENELAKELENGRLFKLLVKLATINERPDLNMEPTWAETGDRYMLKLFRDYVFH
QVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVLVVSYAELRQCLETSFGELV
QSAKDAV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacccatcaatgtttgttgcgtacaccactcaaacaaacggcgttccactggagtcc
aagcttgctacctacatgaatcgtcaaagcccaggggtaactctaagtaccaccgccatt
acaaaacatttgtcgaatctttctctggattcgcagaaaaaggtaactgccagtccagaa
tttgtacctggaaggagtctaactagtagcaacagcagttctccaaatcttttcaataat
tcttatcattcgcaagagaatgtgggcggtactacttatttttaccttgggaatgccgcg
accgatactgttggtgccgaggaaggaactgaaactattgtaaatgtgggagcaggtcag
gtaggctatgtgtatccaggtacacctgcgcatcttcagccagtgaaaccagtgaaacct
ccatcgtctaatagctcttctgctccttctacaccgcctcctcaagcgacacctagcttt
tttgtcagtgaaagtttgcgaatcgacattcttcaaaaaaatgcattaacattagcgcaa
cctgatgtagtacgattccccgacttaccaaacgaggtagataattatcacgagctgtgt
ccactagaaccaatccataaacctgcctcaacgatgcttggatatcaaacgtcaacgtac
aaagctactagcattaaaagcggtacgcgttattgtttacgtcgtatacatgatttcaga
cttgctaacacgaaatgtatggtgctggtagatatgtggaaacgattgtcgcataccaat
ttggtacagttgagagaagtttttactaccaaggcttttggtgaccattccatggtgttt
gtttatgattatcatcctggttcggaaacgctactaaataaacatttctcagctactgaa
ttaaatgggtatacggatccattttcttcagatcccaatgctccccgaccttatagtcat
actaaaaacaccattttgagacaacaacatagcagtatgctaccagagagtgtcatatgg
agctatataattcaactcactgccgcgcttcgtgttatacacgctgctggtttggcatat
agatgtttggaccccacaaaagtgttgctcacatctcgtacaagacttcgtctaagttgc
gtggccataccggacgttgttacattcgatggaaacgcagcaaatccactctcgcttata
ccacattatcaacaggaagatttaatcgctctaggaaagttggtgttggctttagcatgt
cgcagtctccttgccgtccatcgcgacaacatgcaagcctccctcgagctcgtcgcgcgt
tcctactccacggatcttcgaaatctcattctgtatttactttcaaatcaagctcgaaga
agtgtaactgatctcatgccaatgataggagcacgattttatacacaattagacgcggct
ctgctacgatcggacgtgttggagaatgaacttgccaaggagttggaaaatgggagatta
tttaagttacttgtaaaattggccactattaacgaaagacctgatcttaatatggaacct
acgtgggcagagacgggtgaccgatacatgctcaaattgtttagggattatgttttccac
caggtagcagctgatggaaggccgtggttggatatggcacatgttgtatcttgtttaaat
aagttggattcaggttctcaggataagatatgtttgatgtcacgagatgaacaaagtgta
ttagtagtaagttatgcagaattacggcaatgcttggaaacctcatttggagaactggta
caatctgcaaaagatgctgtctaa
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