Colletes gigas: 122395433
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Entry
122395433 CDS
T07492
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cgig
Colletes gigas
Pathway
cgig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122395433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgig03009
]
122395433
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
Pre-60S particles
RNases
122395433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF4288
Motif
Other DBs
NCBI-GeneID:
122395433
NCBI-ProteinID:
XP_043248940
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MKNLTAKQLQRIEKKKKKMTALLEITKLNDKDREAKILALKKASEETRQNNDTDSSSDIS
MVEVSKRKRPCSEDLKEDYLEKSVEKEDTIITEDSNPLANKKPKLIGEEYQKLRQELKER
KKRLKTLPRLQLKAVGENASLSINCKEKDRIPIFLSDIQHLLLFSIHGNDSPYSPSRWCH
LEKYSKVTHTVVLVVEGLSLYHFMAYESMFPHITSKLEFRLEVVTPTAYGGSVVEDLAAV
PITGIQSDRLIKKYGSLEAALQNTGDVIKLLRTVFPMQYYNSNNTESVKKTSELPNNDQF
SRTQLLLSLCQLIEENYPIPLKGDLAKKYENYVMTKDEYVEATAKSPMFGLDCEMCKTTT
GELELTRISVVDEMLNIIYESLVKPENTIIDYLTRFSGITKEILDDVTTTLADVQQVLRK
LLPADAILVGQSLNFDLHSLKMMHPYIIDTAVIFNITGDRSRKTKLQTLVREFLGERIQE
SKSGHCSTEDSIASMKLAQLKLANSVAYGDAVLLHRYNKVLKMEEKRKEYKQALKMERKK
YATSLFKYVTKDQKTAAVVGNEKIMNEYSKYLTASINVMDDENFDKNDQVRLVVADNDKQ
AVNRASQIAMEHAFTLCHIRLQEEKLKPDEIEKTFHAVNKWIRKLWQHMAINGLACVIFT
GENNTGSGACFMNLKREVPENCVIRA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttaacggcaaagcaattacaaagaatagagaaaaagaaaaagaagatgaca
gcgcttctggaaattactaaattaaacgacaaggacagagaagcaaagatactcgctctg
aaaaaagcttccgaagaaacgcgtcaaaacaatgatacggacagtagtagcgatatttct
atggtagaagtctcaaagcgtaagcgaccttgtagcgaggatctgaaagaggattacttg
gaaaaatctgtagagaaagaggatacgataattaccgaagactcgaatccactagctaat
aaaaaaccaaaattgattggggaggagtatcagaaattgagacaagaattgaaagagcgt
aaaaagaggcttaaaacacttcctcggcttcaattaaaagcagtcggtgaaaatgctagt
ttaagtattaattgtaaagagaaggatagaattcctattttcctcagtgatatacagcat
ttattactattctcgatacatggtaatgattcaccttattcgccgtcaagatggtgccat
ctcgagaagtacagtaaggtcacccacactgtggtccttgtcgtcgaagggctttctctc
tatcattttatggcttacgaaagtatgtttccacacataacatcgaaattggaattccgt
ttggaagttgtcacacctacggcatacggaggatcagtagtggaagatcttgcagctgtt
cccataactgggatacaaagcgatagattaattaaaaagtatggatcattagaagctgct
ctacaaaatacaggtgacgtaataaaattattaagaactgttttcccgatgcagtactat
aattcaaataataccgagtctgttaaaaaaacatctgaactacctaacaatgatcaattt
tcgcgaacacaattacttttgtctttatgccaactgatagaagaaaattatccgatacca
ctaaagggcgatttagcgaaaaaatacgaaaattatgtaatgacgaaggacgagtatgtg
gaagctacggcaaaatcaccaatgtttggtttagattgcgaaatgtgtaaaacaacgacc
ggagaattggagctgactagaatatccgttgtcgacgaaatgctgaacattatttacgaa
agtctggtaaaaccggaaaatactattatcgattatctcactcgattcagcggcataacg
aaagaaatattggatgacgtgacaactacattggccgacgtccaacaagttttacggaag
ttgcttcccgcagatgccattctagtgggacaaagcttgaactttgatcttcacagctta
aaaatgatgcatccatatattatcgatacagcagtaatttttaatattactggtgatagg
tccagaaaaacaaagttacaaactttggtcagagagtttctcggcgagaggatacaggaa
agcaaaagtgggcattgttcgaccgaggattcgatagcctctatgaaattagcgcaatta
aaattagcaaatagtgtggcttacggggatgccgtgttacttcatcggtacaataaagtg
ttaaaaatggaagagaaacgaaaggaatataagcaggcgttaaaaatggaaagaaaaaag
tatgctacttcgctcttcaaatacgtaacgaaagatcagaaaacagcagcagttgtgggc
aacgaaaaaattatgaacgaatattcgaaatatttgactgcttcaatcaatgttatggat
gatgagaatttcgataaaaatgatcaagtgcgactcgtagttgcagacaatgataaacag
gccgtgaatcgagcttctcaaatagcaatggagcacgcgtttactttatgccacattcga
ttgcaagaagagaaattaaaacccgacgaaatcgagaaaacgtttcacgcggtgaacaaa
tggatacgtaaactgtggcagcatatggcgatcaacggtttagcctgcgtaatattcacg
ggggagaacaacacaggaagcggtgcctgttttatgaacttaaaaagagaagtacctgag
aattgcgtaatacgagcataa
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