Colletes gigas: 122395445
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Entry
122395445 CDS
T07492
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgig03000
]
122395445
Transcription factors [BR:
cgig03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122395445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122395445
NCBI-ProteinID:
XP_043248967
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSQFSFRGSPNLQCPVTVSSSLASSSASPVSGAILSASGSSLVSVAGTTTNHPLGVAAGL
SNARMAVTSAVVRPPGSPTTSVSPSQGHPPPTTGGPTPTGRCCDTGRPIFTDPLTGQTVC
SCQYELLGGYQRLGALPTAALSMYSAPYAAAAAAAASEGMAAYFPSLGAEQAPFYTPTAA
GLDLKENLGAGAAAAWPYPSVYHPYDAAFASYPFNGYGMDLNGARRKNATRETTSTLKAW
LNDHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVEDEDNN
NEDDDSGRKSVDEKDRLDSKDSGTGSSEDGERPAHRMDLLHGTSGGSGVQGRTESEWSES
RADSGPDSPECLYDQREPRHPLQLQHPAYLATTHGRLLRHPSPESTPPSSHHLPASTSTP
STGSVVTTKPRIWSLADMASKDGDQQSPNPTTMSGLSSPYSGSSGGGGGGGGGGKLVSPL
ASRLPPHHPLHPAMHSGAQFVRPHPDFYRNLYGASHLGSGDMSLLETYSRTLGGLSGVMP
PSTAPSILTSSASAVSATGNVKPFTINGGGGGPAGPAVLLTTASSGLSPSSSSTASSGGS
DQSPHPSGNLPPTQELKSPGRV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagttctcttttcgaggatcgccaaatctacagtgccctgtgacagtgagctcg
tcgttggcgtcgtcctcggcctcgccggtatccggtgcgatactgagtgcaagcggttcg
tcgctggtcagcgtagcaggcacaaccacgaatcatcccctgggcgtagctgccggtttg
tcgaacgcgaggatggcggtgaccagcgcggtggttcggccgccaggcagcccgaccacc
tcggtcagcccgtcccaaggacacccgccgccgacgaccggcggcccaacgccgaccgga
aggtgttgcgacaccggaagaccgatcttcacggacccgttgacgggccagaccgtctgc
tcctgccaatacgagctgctcggcggttatcaacggctcggagccctaccgacggccgcg
ctatccatgtacagcgcgccgtatgcggctgcggccgcggccgccgcctccgagggcatg
gccgcgtacttcccgagcctgggggccgaacaagctccattttacacgcctacggctgct
ggcctcgatctgaaggaaaatcttggggctggagctgcagcagcgtggccttatccatcc
gtgtatcatccttacgacgccgctttcgccagctatcccttcaatggttatggcatggac
ctcaacggcgcgagacggaagaacgcaacgcgagagacgacgagtacattgaaagcttgg
ctgaacgaccacaagaagaacccgtatccgaccaagggcgagaagatcatgctggccatc
atcacgaagatgactctgacgcaggtgtcgacgtggttcgcgaacgcgcgcagacgtctc
aagaaagagaacaagatgacgtgggagccgagaaacagggtcgaggacgaggataacaac
aacgaagacgacgacagcggaaggaagagcgtggatgagaaggatcgattagattccaag
gattctggtaccggttcgagcgaggacggcgagcgaccggcccaccggatggatctgctg
cacggtaccagcggcggatccggggtgcagggcagaaccgagagcgagtggagcgagtcg
cgggcggacagcggcccggacagtcccgagtgtctgtacgaccagagagagccgaggcat
ccgctgcaactgcagcatcccgcgtatctggcgacgacccacggccgattgttgcgtcac
ccgtcaccggagagcacaccgccgagcagccatcatctcccggcgagcaccagcacgccg
tccacgggcagtgtggtgaccacgaagccgaggatctggtcgctggccgacatggcgagc
aaggacggggaccagcagagcccgaacccgacgacgatgtccggtctctcgtcgccgtac
agcggaagcagcggcggcggaggcgggggcggcggtggcgggaaactggtgagccctctg
gcgagtcgtctgcctccccatcaccccctccacccggcgatgcactcgggggcgcagttc
gtgcgaccgcatccggacttctaccggaacctgtacggcgcctctcaccttggatccggt
gacatgtccttgttggagacctattcgaggaccctgggcggcctcagcggcgtgatgccg
ccgtccacggcccccagcatactgacctcctccgcctcggccgtgtccgccaccggcaac
gtgaaaccgttcacgatcaacgggggcggcggcggacccgctgggccagccgtcctcctg
acgaccgcgtcctcgggcctgtccccgtcctcctcgtcgaccgcctcctcgggcgggtcc
gaccagtcgccccatccgagcggcaacctgccaccgacgcaggagctcaagtcaccgggg
cgagtgtga
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