KEGG   Colletes gigas: 122395579
Entry
122395579         CDS       T07492                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cgig  Colletes gigas
Pathway
cgig03020  RNA polymerase
cgig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122395579
  09124 Replication and repair
   03420 Nucleotide excision repair
    122395579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgig03021]
    122395579
   03400 DNA repair and recombination proteins [BR:cgig03400]
    122395579
Transcription machinery [BR:cgig03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122395579
DNA repair and recombination proteins [BR:cgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122395579
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Ogr_Delta DUF4892 SR1P RIM2a_ZnF Zn_Ribbon_TF
Other DBs
NCBI-GeneID: 122395579
NCBI-ProteinID: XP_043249199
LinkDB
Position
Unknown
AA seq 130 aa
MSKITGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYV
NKIMHEIDELTHIVADVISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCT
NQHCSHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcgaaaataactggatacgatacgcacgacgatggaccaggtttcgttgggatcaga
ttttgtcaagaatgcaataacatgttatatcccaaagaagataaagaaaacaaagtattg
atgtacgcttgcagaaattgtgatttcaagcagctagctgacagcaattgcatttatgta
aacaagattatgcacgaaatcgacgaattaacgcacattgtagcagacgttatatcagat
cctactctaccaagaaccgaagaacatccttgtccaaagtgtaaccatagagaagcggta
ttttttcaagcacagaccagacgagcggaagaggaaatgaggttatattatgtgtgtact
aatcagcattgttctcataggtggacggaataa

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