Colletes gigas: 122395610
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Entry
122395610 CDS
T07492
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
cgig
Colletes gigas
Pathway
cgig04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122395610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgig03000
]
122395610
Transcription factors [BR:
cgig03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
122395610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
122395610
NCBI-ProteinID:
XP_043249246
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MGQSDDIEDSTYSRHQDLCQKLNMDATAASEAWKSYESIRQNYTLEGDQLHWIGCALYVA
CRKSSIPTVGKTGANVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMSQDFRSKIEK
LEGNFSVSMVIFKKYQPIFTDIFKDPADDISRPPRSRRHKAMPCTPARVFEFCWTLFICI
KGAFPDISDDLVNSYHLLLVCCDLIYNNALLANRKDLLNPNFPGLPHNFNDENYTPPQTE
NCIVSLLCERHEAIAVEAKVIKEYYLKNHINQLFKERVLRGDQSNFSGILEALNFDGNNK
AINKVYEQHVLSVGDFDERIFLADWRRIRLNGISSLEIVGEDITYAKLFKRIFLKGQDAS
NNIGSPTQMMNISDLQEQFQLKREQYSGQIQHLAPPTPLTGRGYLRPKDITNVTPVSTAT
QSVIRLQAMLAGQTSPSENLLQILNSCSQDVKSLVEVKVKEIGEQFCANYNNSTNASEST
SDFGKKRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLMNEVFIQCLFACCLEIVIYSY
KSNDKVFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVKHLNQIEEKILESLAWQSDS
PLWGAIQSTTEGVPSCEEVSLPGTLETVDPNIPGQPVLRRIALDRGTHHDVQQSPISSAS
ERFQSPVAASGIAKKRLFPDTRIGGQSVLRVGGQNVLPSKVLTIFGNSRILQLPEQITVP
RSSNAPTTSTPIQTVTMNREPAKPKRTGSVALFFRKFYNLASVRMLDLCSSLEIMDIDLK
KKIWTIFEYSVKERTDLMKDRHLDQILMCAIYVICKLAKVEKNTFTEIMRCYRLQPQAES
HIYRSVLIVKTPFNEPQVNNDEPGPRDVSDQEMNVAPPTPTNMAGTSQNFGEETRGDLIK
FYNTVYVPQVKEVANRLGLSRGSVMNLSLSPLPKGKPLASSPVRRVTGSIKTRTLDPKAI
SASPAPQLSYCFSRSPAKDLEAINRMMISVDPKRSVGKRLLSDDTDVEMTEGRSPIKKTT
AFVARKLENIIGERRTQNQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggacgacattgaagactctacttacagtaggcatcaagatttgtgtcag
aaattgaatatggatgcgactgctgcgtccgaggcctggaaatcctacgagtctattcga
caaaattatactctcgagggtgatcagttacattggataggctgcgcattgtatgtagca
tgccgcaagtcttctatacctactgttggaaaaacaggcgctaacgtagaaggcaattgc
gtgtcattgacacgtctgttgcaattgtgcaaccttccgttaatacagtttttcacaaaa
agcaaatcttgggcagacatggccaacatgtcgcaagactttcgctcaaagatcgagaag
ctggaaggaaacttttccgtttctatggtcatatttaaaaagtatcaaccgatctttacg
gatatattcaaagatccagcggatgatatttcacgaccaccgagatccagacggcacaaa
gcaatgccttgtactcccgccagagtatttgaattctgttggacattatttatttgcata
aagggagcatttccagatatctcggacgatttggttaattcttatcatttacttttagtt
tgttgtgatcttatatataacaatgctctgttggctaataggaaagacctcttaaatcct
aactttccaggtctacctcataattttaacgatgaaaattataccccgccacaaacagaa
aattgtatagttagtttattgtgcgaacgtcacgaagctattgcggttgaagctaaagtc
attaaggagtattacctgaaaaatcatatcaatcaactgttcaaggaaagagtattgcgc
ggagatcagtcgaatttttctggtattttagaagctttaaattttgatggtaacaacaaa
gctatcaataaagtgtacgaacaacatgtactaagtgttggagactttgatgaaagaatt
ttcttagctgattggagacgaatcagactaaatggaatatcaagcttggaaatagtggga
gaagatattacttatgctaaattattcaaacgtatttttttgaaaggtcaagatgctagt
aataatattggctcccctacgcagatgatgaatattagcgaccttcaggaacaatttcaa
ttaaaaagagaacaatacagtgggcagatacagcatttggctccacccactccattgact
ggtcgcggttatcttagaccaaaagatattaccaacgtgacaccggtatctactgcaacg
caaagtgtaattcgactgcaagcgatgctggcgggtcaaacatcgccgagtgaaaacttg
ttgcaaattttgaacagctgctctcaagatgtaaaatcactcgtcgaggtgaaagttaaa
gaaattggggaacagttttgtgctaattacaacaacagtacgaacgctagtgaaagtact
tcagactttggaaagaagagactttacttgggtcagactctgttctatagactgctagaa
atgattttaaacgacgagaaacgcaagaaaccaaattacgatgtaacgaatcttctcatg
aacgaggtatttattcagtgcttatttgcttgttgcttagaaattgttatttactcgtat
aagagtaacgacaaagtgttcccgtggatcctgaatgcattgaatttggacgcttactac
ttttataaagtaatagagatcatagtcagggccgaggatcagctgtcgcgcgatgtcgtg
aaacacttgaatcaaatagaggagaagattttagagtcgctggcgtggcagagcgacagc
cctttgtggggtgcgattcagtcgacgacagaaggtgttccaagctgcgaagaggtttca
ttgccaggcacgttggagaccgttgacccgaatatacctggacagccggtattgaggaga
atcgcattagatcgcggtactcatcacgacgtgcaacaaagtcccatctcgtccgcctcg
gaaagatttcagtcccccgtcgcggcgtccggtatagcaaagaaacgtctgttccccgac
accagaattggcggacagagcgtgttacgggtagggggccaaaatgtcctaccatcgaaa
gttttaaccatcttcggcaactcgcggatacttcagctacctgaacaaatcacggtgccg
aggtcatcgaacgcgcctaccacgagtacaccgatacaaaccgtaacgatgaacagggaa
ccagcgaaaccgaaacgaaccggttccgtggcattgttctttagaaaattttacaatctc
gcgagcgtgcgaatgctagacttgtgcagctcgctggaaataatggacatcgacctgaag
aaaaagatatggacgatcttcgagtactccgtgaaagagcgaacggatctgatgaaggac
cgacacctcgatcaaattttaatgtgtgcaatttatgtaatatgcaagttagccaaagta
gaaaagaatacattcacggagatcatgcggtgttatcgattgcaaccgcaagcggagtcg
catatttatagatcagtgcttatcgttaaaacgccgttcaacgagccgcaagtcaacaac
gacgaacctggccccagagacgtctccgatcaggaaatgaatgtggcgccacctacgccc
acgaacatggctggaacgtcgcagaatttcggcgaggagacgcgcggcgacctgatcaaa
ttttacaataccgtatacgtgccgcaggttaaagaggtggcgaacagattggggctgtcg
cgcggaagcgtgatgaatttgtcgctgagcccgttgccaaaggggaaacctctggcgagt
tctcccgtgagacgcgtcaccggtagtattaagacgcgtacactggacccgaaagctatt
tcggcctctccggcgccgcaacttagttattgcttcagtcgtagtccggccaaggatttg
gaagctattaataggatgatgatctctgttgacccgaagcgatcggtcggcaagcgatta
ttatcggacgacaccgacgtagaaatgacagagggaagatctcccataaaaaagacaact
gcgttcgtcgcacgcaaattggagaacatcattggagaacgacgtacacaaaatcaataa
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