Colletes gigas: 122396118
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Entry
122396118 CDS
T07492
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122396118
03015 mRNA surveillance pathway
122396118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122396118
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122396118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
TBC1D23_C
Motif
Other DBs
NCBI-GeneID:
122396118
NCBI-ProteinID:
XP_043250183
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MPRSINAKDKIEEMQNIDDIVSDFDCIKVSALKKVSRISERLKDGILIGSNSTAIKNESK
KSENIENEQNICNIKPSQKPGQMQNNKISMQSGITFSIKKIFLESEYQRKEEVWKEIERH
CQHMKESGEAIKEHMEISRSHMAKERERKSKENYAYILAEEKIVEQEEIRKRLERQMELE
EYRKRMKEKEELTKKIMTFRNAFKTMYCDIITLSENCRDESSVTNVLSSYTVKLQDLHNQ
MECINEKVKAGDVTSADLNVTEKMVDLIGEILSAFKSEIERINSQYEANLANMESAKQCH
VQSEVLQTQTIDNTENNCEAIAPVLTSISDIQNNEDKHEDHVYEYVDKEFLQMYLNSQQC
LENYAKSYQELLQSASMKKFRFECQKAINIPINAISSFDERHLRDKYDRLHNLLMGKSSP
NINQHPEGPAFCKDVLAKKIVNQGETLVSSKPKMAFPIAAIIVALWNDHSDFGDLILSHF
HTSCPFTIPVFLPKIADQSNENYYKSLGYKYNDDGTIETYEKFVKRMSGLMRLYASITIT
SQRKGINKTNPHGLQNAWRWLAAVLNIEPQIDVTDLCATLLLDMLEVAGAALWTAYPNQF
HKLLILLSEEYCPHMQSVGCIGGGPLVRLNEFLKNSLTKGFIPPPDGQLPPNFW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctccattaacgctaaagacaaaatagaagaaatgcaaaacatagacgatatc
gtttctgactttgattgtatcaaagtatcggctctaaagaaagtttctcgcatatcggag
agactgaaagacgggattttaattggttcaaattcgacggcgatcaaaaacgagtcaaag
aaatccgagaatatagaaaatgaacagaatatatgcaatatcaaaccttcgcagaagccc
ggtcaaatgcagaataataaaatctctatgcagagtggcataacattctcaataaaaaaa
atctttttagaaagcgaatatcagaggaaggaagaagtttggaaggagatcgagcgtcac
tgccagcatatgaaggaaagcggagaagctataaaagagcatatggaaatatctcgctct
cacatggccaaagaacgcgagcgtaaaagtaaagagaattatgcatatatattggcggag
gaaaagattgtagagcaagaagaaatacgtaaaagactggaacggcaaatggaactcgaa
gaatatagaaaaagaatgaaagaaaaagaggagttgactaaaaaaataatgacctttaga
aatgcgtttaaaaccatgtattgcgacattataactctctctgaaaattgtagagacgag
agttctgttactaacgtattatcttcttacactgtgaaattacaagacttgcataatcaa
atggagtgtataaatgagaaagttaaggcaggggatgtaacatccgccgatttgaatgtt
acagaaaaaatggttgatctaatcggtgaaatattgtctgcttttaaatcggaaatagaa
aggataaactctcagtacgaagcaaatttagctaatatggaaagtgcaaagcaatgccac
gtacaatccgaagttttacaaacccaaacaattgacaatactgaaaataattgtgaggca
attgctccagtattgacgagcattagcgatattcaaaataatgaagacaaacacgaagat
catgtgtacgaatatgtcgataaggaatttttacaaatgtacttgaatagccaacaatgt
ttggagaattatgcaaagagttatcaggaacttctacagtctgcgagtatgaaaaagttt
cgattcgaatgtcagaaagcgataaatatacctataaatgcaatctctagtttcgacgaa
cggcatcttagagacaaatacgacagattacataatcttctaatgggaaaatcgtcgcca
aatatcaatcaacatccggaggggccggcattctgcaaagatgttttggctaaaaaaata
gttaaccaaggtgaaacgttagtttcgagcaaaccaaaaatggcatttccaatagccgcg
ataatcgtagcactttggaacgatcattctgatttcggcgatttgattctatcacatttt
catacctcttgtccgttcacgattcccgtgtttctgccgaaaatcgcagaccaatcgaac
gaaaattattacaagtcgttgggatataaatataacgatgacggcacgatcgagacgtat
gagaaatttgtgaaaagaatgtctggtttaatgagattatacgcttcaattactatcacg
tcgcaaagaaaaggcattaataaaactaatccacacggacttcaaaatgcgtggcgatgg
ctagccgctgttttaaatatcgaaccgcagatagacgtaacggatctttgtgcaaccctt
ttattggacatgctggaagtggcgggggctgcactgtggaccgcgtacccaaatcagttt
cataaattattgattttattgtcggaagaatattgtccgcacatgcaaagtgtgggatgc
atcggcggtgggccgttggtacggctcaacgaatttttgaagaatagtttaacgaaaggt
ttcataccaccccccgacggtcaacttcctccaaatttctggtga
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