Colletes gigas: 122396294
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Entry
122396294 CDS
T07492
Name
(RefSeq) transient receptor potential cation channel trpm isoform X1
KO
K04978
transient receptor potential cation channel subfamily M member 3
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgig04040
]
122396294
Ion channels [BR:
cgig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122396294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
122396294
NCBI-ProteinID:
XP_043250489
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MAIGNIICGTSTPKMKRKKAKATERSWIEATFQKRECSKFIPSAKDEHRFMQVQGDKNAE
YDVITTSRCCCGYSYTHHCGTGADVQSYTASNTKEKDREQWSPGKNTRPFPTDAYGTIEF
QGGPHPTKAQYVRLAHDTRPEPIVQLLCREWNLGLPKLLITVHGGRPNFDLQPSLKKVLR
KGLLKAAKTTGAWIFTGGTNTGVTRQVGDALLLERSQRQGRVVSIGIAPWGILDKSHELV
SRGGEVPYDCLSSPWSKYAVLNNRHAYFLLVDNGTGGRYGAEIVLRRKLEKYISNLKLQP
YTHSSIPVVALVIEGGTNTIRSVLEYVTDDPPVPVVVCDGSGRAADLIAFMHKYASEGDG
ENGDNEGPLESMREHVLETIKRTFKVSTEPACQLYSELLQCTRKKHLITVFRITQDRPQE
LDQTILTALFKSKQLSPAEQLSLSLIWNRVDIARSEIFVYGQKWPPGALEQAMMQALQHD
RIDFVKLLLENGVSMRKFLSIPRLEELYNTKEGPSNTLGYILRDVRPNIPRGYMYTLHDI
GLVINKLMGGAYRSQYTRRRFRVIYTKVMKRSGAHQQHMHRNSCAWGGATRYYTGSGNKQ
ESSTISLLAETLPANRDTPLFDYPFNELLIWAVLTKRQQMALLMWQHGEEALAKSLVALK
LYKAMAHEAAEDDLETEVYDELRNYGKEFENIALELLDYCYRQDDDQTQQLLTSELQNWS
GQTCLSLAVTANHRPLLAHTCSQIILADLWMGGLRTRKNTNLKVVLGLVCPFYITRLEFK
SREELQLMPQTQEEHLIALEDEKEDSDSEHGAPTGPDVEKRQRRSLSVRNKSSSQQGAKL
SSRKTSVYSVSESVPALISNEHTTTVVKETIVQENGKVLTDNDDGVHRSYGIHSDYYDTK
TSRPLRLKKKLYEFYTAPITKFWANAIAYIIFLVLFSYCILIHMDDHPSLAEIYAITYVC
TLGCEKVREIATSEPATLSHKFSVWTWNMWNPCDTGAIIIFQIGLGLRLRHSTLDVGRVI
YCVDCIYWYLRIFNILGVNKYFGPLVTMMGKMVKNMIYFVVLLLVVLMSFGVTRQAILNP
NAEPKLKIIRDIFMEPYFMLYGEVYADNIDPDCGDEPGMIPCLPGRWITPAVMSIYLLVA
NILLINLLIAVFNNIFNEVNAVAHQVWMFQRFTVVMEYEQKPVLPPPLIVVCHIYLLVKY
LLRYVTQGKASAGETYDNGLKLFLEVDDMERLYDFEEDCVEGYFREQELKLQMSTEERVK
VTTERVENMHQKIEDIDKKEHTQNASLQAVEFRIRKLEELNEQTLAHLGVIHRFMATHMP
NIETLSGFDVEGRVRRVSERSEVLSETDSHTQLPTIALKRKRLMRSLTDGTFLNMGQPLD
DDVLKHSEVATSRENLSRNESSVSGDGQIVQDDVKTTTSQETEVSKGDGEGETIKKESQT
DSREPSMDPSVDPSREPSSRELSTDPSRQTSRELSRETSREATSREATSKEPSREASSEA
PASEPTRQDSTERPTRQNSRTRSESDDVMVLPSRGVTWAEPRVAVIPSVSSTSSTQRSIL
LAMRAEYTSITDELESYCGLLSPPRTPPISPPPSRARHHTGMSNAEMAWQIENEHLRDAE
ECDYQQMEDLIQRRYIGDDDEPVHTSDEASGGGLFFVSNEHRHQLRRSSAIDEESRRPAP
TISVTREIEQTLSRPPIRDSESSDPNDKNLSTVPAPASETMC
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atggcaattggaaatattatctgtgggacaagcactcctaaaatgaagagaaaaaaggca
aaggcaaccgaacgcagttggatagaggcgacttttcaaaaaagggaatgttcgaagttt
attccaagcgctaaagatgagcacaggtttatgcaagtacagggagataagaatgcagag
tatgatgtgatcactacttccagatgttgttgcgggtattcttatactcatcactgcgga
accggtgcagacgtacaaagttatactgctagcaataccaaagaaaaggatcgagagcaa
tggtcacctggtaaaaatacacggccgtttccaaccgatgcatacggtacgattgaattt
caaggcgggcctcatccaacgaaagcacagtacgtgagactagcccacgatacaaggcca
gagccaatagtacaattactatgtagagaatggaatttaggattaccgaaattgctgatc
actgtacacggtggtcgtccaaattttgatcttcagcctagtttgaaaaaagttttgaga
aaaggtttattgaaggctgcgaaaacaaccggcgcatggattttcacaggtggaactaac
acaggcgttacgaggcaggtaggagacgcattgctgttggaaagatctcaaaggcaggga
cgcgttgtgagtataggcatagcgccatgggggattttagataaaagccatgaacttgtg
agccgcggaggcgaagtaccctatgattgcctttcatctccatggtccaaatatgcggtt
ctaaataatcgacacgcgtattttttattggtggacaatggtactggcggtcgttatggc
gcggagatcgtgttgcgcaggaaattagagaaatatatctccaatttgaaattacagcca
tatacgcacagcagtatacctgtcgtggcattagtgatcgagggaggaacaaacacaata
cgttcggtactggagtatgttacggatgatccacctgttcctgtagtggtttgcgatggc
tcgggccgtgcagctgatctcattgctttcatgcacaaatacgcgtcggaaggtgatggg
gagaacggggataacgagggaccattagagagtatgagagaacatgttttggaaactata
aagcgcacctttaaagtttctaccgaaccagcgtgccaattgtactcggaacttctgcag
tgcacgcgtaagaaacacttgataacagtatttaggataactcaagatcgtccccaagaa
cttgaccaaacaatattgacggcattgttcaagtccaaacaattgtcaccggccgagcag
ttatcgttatccttgatttggaacagagtggacatagcacgcagcgagatatttgtttac
gggcaaaaatggccgccgggcgctttggaacaagccatgatgcaagcattgcaacacgat
agaatcgattttgtaaaactgctactggagaatggcgtctctatgcgaaaattcttatcg
ataccgcgtctcgaagagctttataataccaaagaaggcccttcgaatacactgggctat
attctgcgcgacgtgcgaccaaatatcccgcgtggttacatgtacacgttacacgacatc
gggctcgtgataaataaattaatgggtggggcgtaccgttctcaatacactcgcagacga
tttcgcgtgatctataccaaagtgatgaaaagatcgggggctcatcaacagcacatgcat
cgaaacagctgtgcatggggcggcgccacccgttactatacaggatccggtaacaaacaa
gagagctcgacgataagtttgctcgctgaaacgttgccagctaatcgtgatacacctctt
ttcgattaccccttcaacgagctgcttatttgggccgttctgacgaagcgccagcaaatg
gcgttgctgatgtggcagcacggcgaggaagcattggcgaagtcgctcgtcgccctcaaa
ttatacaaggccatggcgcacgaggccgccgaggacgacctcgaaacggaagtgtacgac
gagttacgaaattacggaaaggaattcgagaacattgcgttagagttgttagattactgc
tatcgccaggacgacgatcagacgcagcagcttttaacctctgaacttcagaactggtcc
ggacagacgtgtctttccctagctgttacagccaatcatcgtccactgttggcgcatact
tgcagtcaaatcattttagctgatctatggatgggcggacttcggacaagaaagaacaca
aatttgaaggttgtactcgggctagtctgtccattttacataacacgtttggaattcaaa
agtcgcgaagagttacaattaatgccgcaaacccaagaggagcatttgattgctctcgag
gatgaaaaggaggacagcgattccgagcacggcgcgccaaccggtcctgacgtcgagaaa
cgtcagcgcaggagcctgagcgtacgcaacaaatccagcagccaacaaggcgctaagtta
tcatcaaggaaaacttctgtttattcagtatcggaatccgtaccggccttgatcagcaac
gaacacactacaacggtggtgaaagaaacgatcgtgcaagaaaatgggaaagttctgacg
gacaatgacgatggcgttcatcgttcctatggcattcactccgactattacgatactaag
accagccggccgttgcgactgaagaaaaaattatatgaattttatacggcccctatcact
aaattttgggcgaacgctatagcgtacattatctttttggtactcttctcatactgcatt
cttatacacatggatgatcatccatcgctggcagagatctatgcaatcacgtatgtctgc
acattgggatgcgagaaagtacgtgaaatcgccacatccgagccggccactctttcgcac
aagttcagcgtatggacatggaacatgtggaatccttgcgacacgggcgccattatcatt
tttcaaattggtcttggcttacgtttgcgacattccacgctcgacgttggtcgtgtcatc
tactgcgttgactgtatttattggtatttgcggatattcaatatccttggtgtaaataaa
tactttggtccattggttaccatgatgggaaagatggtaaagaacatgatatactttgta
gtgctcttgctagtcgtattgatgagctttggtgtaacacggcaagctattttaaacccg
aatgctgagcctaaattaaaaatcattcgagacatattcatggagccatatttcatgctg
tacggagaagtgtacgcagacaacatagaccctgattgcggagacgaaccgggaatgata
ccatgtcttccaggccgttggatcacacctgctgtaatgtctatttatcttttagtcgca
aacattttgctgataaaccttctgattgcggtttttaacaatattttcaatgaggtaaac
gcggtggcgcaccaagtttggatgttccaacgttttactgtcgttatggagtatgaacag
aaaccagttttacctcccccgctcattgtagtttgtcacatatatctgctggtgaaatat
ttgctgcgatatgtgactcaaggcaaagcaagtgcgggtgaaacgtacgacaacgggctt
aagttgttcctagaggtcgacgacatggagcgtctctacgattttgaagaagactgcgtc
gaagggtactttcgcgagcaagaactgaagctgcagatgtcgacggaggagagagtgaag
gttacgacggaaagggtcgagaatatgcatcagaagatagaagacatcgataagaaggaa
cacacgcagaatgcttcgctgcaggcggtggaatttcgcatccgtaagctggaggagttg
aacgagcagacattggctcacctgggtgtcatacatcggttcatggcgacgcacatgccc
aacatagaaacgttatccggcttcgacgtggagggacgcgtacgcagagtgtcggaacgc
tcggaagttctatcagaaacggattctcacacgcaactaccgaccatcgcccttaaacgc
aagaggctgatgcgatcgttgaccgacgggacgttcctcaacatgggtcagccgttggac
gacgacgtgttgaaacattcagaggtggccacatctcgcgagaatcttagcagaaacgaa
tcatcggtaagcggagacgggcagatcgttcaggacgacgtgaagacaacgacgagccag
gaaaccgaggtgagcaaaggggacggcgagggggaaactataaagaaggaatcgcagacg
gacagcagagaaccgagcatggatcccagcgtggatccaagcagagaaccaagcagcaga
gagttgagcacagaccccagtagacaaacgagcagggaactgagcagagagacgagcaga
gaagcaaccagcagagaggccaccagcaaagaaccaagcagagaagcgagcagcgaggca
cctgcctcggaaccgaccagacaagactccacggaacgtcccacgcgacaaaacagcaga
acacgatcagagtccgacgacgtgatggtgttaccctcgagaggtgtcacctgggccgag
ccacgagtagctgtgatcccatccgtgtcgtcgacgagcagcacccaacgttcgattctg
ctggcgatgcgcgccgagtacaccagcataaccgacgagttggagagttactgtggcctt
ctcagcccgcctcgtacgccaccgatctcgccgcccccttcgagggccaggcaccacaca
ggcatgtccaacgcggagatggcctggcagatcgagaacgagcatctgcgcgacgccgag
gaatgcgattaccagcagatggaggatctgatacagagaagatacataggcgacgacgac
gagcctgtgcacacgtcggacgaggcgagcggcggcgggctgttcttcgtatcgaacgag
cacaggcaccagctacgcagatcgtccgccatcgacgaggaatctcgtaggccggcgcct
actatcagtgtcacgagagagatcgaacaaacgctgtcacggccgccgatccgcgactcg
gaaagttccgatccgaacgacaagaacctgagtaccgtacctgctccagcatcggagacc
atgtgctga
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integrated database retrieval system
