Colletes gigas: 122396539
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Entry
122396539 CDS
T07492
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cgig
Colletes gigas
Pathway
cgig03022
Basal transcription factors
cgig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122396539
09124 Replication and repair
03420 Nucleotide excision repair
122396539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122396539
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122396539
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122396539
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122396539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
122396539
NCBI-ProteinID:
XP_043250991
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MASEIETSLLIIVLDVNPMQRIVKHETRILTQCLDSTIVFANSHLMQSSNNQLAVIACHS
HGATFLYPCEKPSEIRQIDGQYEKFTMVERTVRHQLQLIINEISMDKPLNGESLISGALT
MALCYVARLEREKVAVEKLHSRILVITASNDSAMQYMNYMNIFFTAQKMGIILDVCSLDQ
ELTLLQQGCDITGGNYLKVPQLSGLLQYLLWIFLPDPNIRSKLVLPPPVKVDYRAACFCH
QELIDIGYVCSICLSIFCKFSPICTTCHTVFKMPGPMPMKMKKKKKNVDIVH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgaaatagaaacaagcctgcttataattgtattggatgtaaacccaatgcaa
agaattgtaaagcatgaaacaaggatattgacacaatgtttagattccactattgtgttt
gccaattctcatttaatgcaatcctccaataatcaattggcagtgatagcatgccacagt
catggagcaacatttttgtatccgtgtgaaaagccatcagaaataagacaaattgatgga
caatatgaaaagtttaccatggtagaacgtactgttaggcatcaactgcaattaattatt
aatgagatttctatggataaaccattaaacggagaaagcctgatatctggggcattgacc
atggcgttgtgttatgttgcaagattagagagagaaaaagtagcagtagagaaattacat
tcaagaattcttgtgatcactgcaagcaatgattctgcgatgcaatacatgaattacatg
aacatatttttcactgctcagaaaatgggaataatactggatgtatgcagtttagatcaa
gagctgactttgcttcaacaaggctgtgatataactggtggaaattatttaaaagttcca
caattaagtggattgttacagtatttattatggatatttctgccagatccaaatattaga
tcaaaattagtattaccaccacctgtgaaagttgattatcgtgcagcatgtttttgtcat
caagaacttattgatattggctatgtgtgctccatatgtttatcaatattttgtaaattt
agtccaatatgcactacttgccacacggtgtttaaaatgccaggacctatgcctatgaaa
atgaagaaaaagaagaagaatgtagatatagttcactaa
DBGET
integrated database retrieval system
