Colletes gigas: 122396679
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Entry
122396679 CDS
T07492
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cgig
Colletes gigas
Pathway
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122396679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122396679
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122396679
U7-dependent histone pre-mRNA processing factors
122396679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
122396679
NCBI-ProteinID:
XP_043251207
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MSNSTISDQSLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGY
GFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGQNTENPYGEAVQ
ADKAPEAISKAVASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMR
IVDPHTAVNMLHKANPIPSVLTPTDKPPVHPIVPRIEEPWAPARPAPVTNPPAPIFAGQD
VDLRTLDRQMDPRLARMDQDLRGPQQVQPTPVSAPPVVSTNTDPRGLSTFSIADNALPVE
GVESFCRDPRTDRFVRDPRDPRDPRMPIDPRITKANPPVPVAPPVVPRPVAAPIVQPTNV
VAASVTVPAPTLPVSTTSATSRLMAGMSSAGNIPSGASDQEKAALIMQVLQLSDEQIAML
PPEQRQSILVLKEQIAKSTQR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaactatttcggatcaatcgctcatggataagtccatgcggagtgttttc
gtcgggaatatcccgtacgaagctacagaagagaatttaaaggatattttcagcgaagtt
ggaccagtactttctttcaaattagtgtttgaccgagaaacaggcaagcccaagggctat
ggcttttgtgagtacaaagatcaagaaactgctcttagtgctatgagaaatttgaatggt
tatgaaatcggcggaagaacattacgtgttgacaatgcttgtacagaaaaaagtcggatg
gaaatgcagagccttttgcaagggcaaaatactgaaaatccttatggcgaggcagtacaa
gccgataaagcaccggaggctataagtaaagctgttgcgtcgctgccgcctgagcaaatg
ttcgaactaatgaagcaaatgaaactctgtgtacaaaataatccaaacgaggcgcgtcaa
atgctgctccaaaatcctcagctggcctatgccttgctgcaagcacaggtagtgatgcga
atagtagatccacacacagcagttaatatgttacataaagcaaatccaatcccaagtgta
ttgacacctaccgataaaccacctgtacatccaatcgtaccacggattgaagaaccatgg
gctccagcacgaccagcaccagttaccaatcctccagcacccatctttgccggacaagat
gtcgatctacgtacattagatagacaaatggatccacgtttagctagaatggatcaagat
ctaagaggaccacaacaagtacaaccaacacccgttagcgcgcctccggtcgtatccacc
aacactgatcccaggggactgagcacgtttagtatcgccgataacgctcttcctgttgaa
ggagttgagagcttttgtcgtgatccaagaacagatagatttgtcagagatccaagagat
cctagagatccaaggatgcccattgatccgagaattacaaaagctaatccaccagtgcca
gttgcaccgccagtggtgcccagacccgttgctgcacctattgttcaacctacaaacgtt
gtcgctgctagtgttacagttcccgcacctacacttccggtatctacaacgtccgcaacc
tcgagactgatggcaggtatgtcatcagcaggtaatatacccagtggggcatcggatcag
gagaaggctgcattgataatgcaagtattacaattatcagatgaacaaattgctatgtta
ccgcccgaacaaagacaaagcattttagtacttaaagaacaaatcgcgaaaagtacacaa
cgttaa
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