Colletes gigas: 122397046
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Entry
122397046 CDS
T07492
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122397046
09123 Folding, sorting and degradation
03018 RNA degradation
122397046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122397046
03041 Spliceosome [BR:
cgig03041
]
122397046
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122397046
mRNA degradation factors
5'-3' decay
Lsm complex
122397046
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122397046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122397046
NCBI-ProteinID:
XP_043251802
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGQGQRGRGSGRGTFGRGGRGPAPL
GRGGANQGFLYPQNWI
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgttacctttatcgttattaagaacagcacaaaatcatcctatgcttgtcgagctcaaa
aatggcgaaacgtacaatggacatttagttagctgtgatagttggatgaatataaatctt
agagaggttatatgcacgtccagggatggcgataaattttggagaatgccagaatgttac
attcgaggtagtacaattaaatatttaagaatacctgacgaagttatagacatggtaaag
gaagatgtgcaaatgaaatcaaggggccgaggtgaaatgaaaggaagaggacaaggccaa
aggggacgcggtagtggaagaggtacctttggtcgtggaggaagaggtcctgcgcctctt
ggtcgtggcggtgctaaccaggggtttctatatccacaaaattggatatag
DBGET
integrated database retrieval system
