KEGG   Colletes gigas: 122397083
Entry
122397083         CDS       T07492                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
cgig  Colletes gigas
Pathway
cgig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122397083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgig03019]
    122397083
   03036 Chromosome and associated proteins [BR:cgig03036]
    122397083
Messenger RNA biogenesis [BR:cgig03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122397083
Chromosome and associated proteins [BR:cgig03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     122397083
    COMPASS/SET1 complex (yeast)
     122397083
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 MIOS_WD40 Beta-prop_Vps41 PD40 PROPPIN WD40_like Arylsulfotran_2 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 122397083
NCBI-ProteinID: XP_043251885
LinkDB
Position
Unknown
AA seq 315 aa
MKLVDHVVRSFKVAKVFRENSDRINSIDFSPNGDTLISCSEDDQIVIYDCEKGTQVRTVN
SKKYGVDLIHFTHAKNTAIHSSTKIDDTIRYLSLHDNKYIRYFPGHSKKVVSLCISPIED
TFLSGSLDKSLRLWDLRSPNCHGVMNVSGRPVAAYDPEGLIFAAGVNSEFIKLYDLRSFD
KGPFVTFKLSQEKECDWTGLKFSRDGKTILISTNGSTIRLIDAFHGTPLQTFAGYLNNKG
IAIEASFSPDSQFVFSGSTDGRVHVWNAETGYKVCVLNGDHPAPVQCIQFNPKYMMLASA
CTNMAFWLPTVDESA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagctagttgaccacgtggtgaggagcttcaaggtggccaaggttttccgtgaaaat
tccgaccgcataaacagcatcgacttttcaccaaacggagacactttgatttcttgttcg
gaagatgaccagatcgtgatatatgactgtgagaaaggtacccaggtgcgaacagtcaat
tctaagaagtatggtgtagatttaattcatttcacccacgcaaagaataccgcaatacac
agcagtaccaagattgatgacacaattcgttatctaagtctacacgacaacaagtatata
agatatttcccaggtcatagcaagaaagttgtatcgctatgtatcagtcccatagaagac
acatttctctctggttctttagataagtctttaagactatgggatttacgttcacctaac
tgtcatggtgttatgaacgtttctggacgtccagttgctgcatatgatccagaaggtctt
atttttgctgcaggtgtcaattcagagttcataaaattatatgatttacgcagttttgat
aagggaccatttgtcacatttaaattgtcacaagaaaaggaatgtgactggacaggatta
aagttcagcagagatggtaaaacaatattgatttccacgaatggcagcacaattcgtttg
atcgatgcatttcatggtacacctttacaaacatttgctggttacttgaataacaaagga
attgcgattgaagccagttttagtcctgattcccaattcgtattcagtggatctacggat
ggcagagtgcacgtatggaatgctgaaacagggtacaaagtttgtgtgctcaatggtgat
catccagcacctgttcaatgtattcaatttaatcctaagtatatgatgctagcatcagcc
tgtaccaatatggcattttggctacccactgtcgatgaaagtgcataa

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