Colletes gigas: 122397148
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Entry
122397148 CDS
T07492
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122397148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122397148
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122397148
mRNA degradation factors
5'-3' decay
Decapping complex
122397148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
TOR1L1_C
Motif
Other DBs
NCBI-GeneID:
122397148
NCBI-ProteinID:
XP_043252011
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MIKTGEDNLKHPHYQQTVEFSGQEDQHSVGLYSANVTVIPSPGGHNHGSSKVTLKNIVDF
TWEHNFYSGQLLAVHMSGKYLAYGIKVSNGGGMVRVVYKELEQRTLLRGMRAAIQDLAFA
HVANAILACVDYLGNLFIHTIESTPSELQCSLLLQVIAEDISATSHRVIWCPYIPEDVPS
DGDEVSKLLVLTRGSKAELWSVNTITSRFRSIEATDPAAKENGGMLEIDQHSDTIVEATF
SPDGTALATASFDGEVKFFQVYLHGNSHGNQAQPRCLHQWRPHGGRPISCLFFLDDHKTY
HPDVQFWRFAITGCNNNTELKVWSCELWTCLQTIKFAPTPSTSKLPILKAGLDLSAGYLL
LSDIYDKVLYILSLTKDSGEALASVTTISEFLLPYPILSFGIVDAGLCKVRSTGESLEDL
CPYEEETEEQVLIIRMYLVQPKSLQECHIAFKPASRVIGNSLRDSLTRDSLDYSEDLQNM
ETVNQNGISEENCEEEHSLSAKIDAATNHNTGLNLMTPDAFSSPAKKENSELDSPPGSPE
LDKVLSASPFLAQTVQALNATDPPLVVSELEEQAPASSGSSPSREVREIMSLTKPDEEPE
TENKPEATNAVGEDWPNIPMGLLKDVSRHAMQEAEGYTSEDEKKKKLKDETKSTTHTTGD
TESSWQTANELKTLELINKVESVLEIIQDQREEIREVLREELSQVDFAISRYFEEQNAIL
DQTLYEEMSRQYVFRNNLGTTIKEQIETVLPGLVKDTIEPLKQQLNLDSTRMDELLKENL
TELINSTHVKDTLALAAANGVKPALDVAFKEAFTNVLLPGMEQACQTMFRQVQDAFVKGT
HEYLQNVDVITSKQYQQRNEQQSEALSALICEELQTELNRCLTALQEETIRTIHDSVRDN
LNQQLTEITNARSRATTPAIPVPGVADVQARVMSLLQRGHLNAAFQQALSASDLGLVVLV
CEKTEPARVFSRAMGPQGQSTRCILPQPVILSLVQQLSADLEHRTDLKHRWLEEAILNLD
PNDPVTREHMGTVLTTLQNQLAAFVATNSNSISTRRMRMLAMAARALLNQHP
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacaggagaggataacctaaaacatccccactatcagcaaacagtagaattt
agtggccaggaggaccaacattcggtcggattatacagtgccaacgtcaccgttattcct
tcacccggggggcacaatcatgggagttccaaggtgacactaaaaaacatcgttgatttt
acgtgggaacacaatttttattccggccaattattggcggttcatatgtccggaaaatat
ttagcttatggaataaaagttagtaatggaggaggtatggtcagagttgtatacaaagaa
ttagagcaaagaacactgttaagaggaatgcgtgccgcgatacaggatctggcttttgcg
cacgttgcaaatgcgattttagcatgcgtcgactacttgggaaatctttttatacatacc
attgaatcgacaccgtctgaactgcaatgtagtttattgctacaagtaattgcggaggac
atatctgccaccagtcaccgtgtaatatggtgcccgtatatcccggaggatgtaccgtcc
gacggagacgaagtttcgaaacttttagttttaactcgtggttcgaaagcagagttgtgg
tcagttaataccattacatcaagattcagatcaatagaggcaactgatccagctgcaaag
gaaaatggaggcatgttggaaattgatcaacattctgatacaatcgttgaagcaactttt
agtcccgatggcacggctttggctacagcaagctttgacggagaagtgaaattcttccaa
gtttacttgcatggtaattctcatggcaatcaagctcagccgcgctgtttacatcaatgg
aggccgcacggaggacgacctatctcgtgtttattcttcttagatgaccataaaacgtac
catcccgatgtacaattttggagatttgccataactggatgtaacaataatacggaatta
aaagtctggtcgtgcgaattgtggacttgtttgcaaaccattaaatttgcgccaacacct
tctaccagcaaactaccaatattaaaagcaggtttagatcttagtgctgggtatcttttg
ttatcagatatatacgataaagttttgtatatattaagtcttacaaaagatagcggagaa
gcgttagcatccgtaaccacaatatcagagttcctcctgccatatccgatactaagcttt
ggaatcgttgacgctggtctgtgcaaagtacgttctaccggcgaatcattagaagacttg
tgcccttacgaagaagaaaccgaagaacaagttttaattatccggatgtatttagtacaa
ccaaagtctctgcaagagtgtcatattgcttttaaacctgcctcgcgagtgattggcaac
agtctcagggattcattgactcgcgattcattggactatagcgaagacttacaaaatatg
gagaccgttaatcagaatggaatctctgaagaaaattgcgaagaggaacattcgttgtcc
gccaagattgacgcagcaacgaaccataacaccggattaaatttaatgacaccggatgct
ttcagttcacccgccaagaaagaaaatagcgaactcgattctcctcccggtagtccagaa
ttggataaagtgctatctgctagtcccttccttgcacaaactgtacaagctctaaatgca
acagatccgccattggttgttagcgaactggaagaacaagcacctgctagcagtggtagt
agtccatccagggaagtcagagaaatcatgtctctcacaaaaccggatgaagaacctgaa
actgagaataagccagaagctactaacgctgtcggtgaagattggcctaatattccgatg
ggtttattaaaagacgttagcagacacgcgatgcaagaagctgaaggatacacgagcgaa
gatgaaaagaaaaagaaattaaaagacgagacaaaatcgacgacgcacaccacgggagat
acagaaagtagttggcaaacggcgaacgagttaaaaacactcgaattaataaataaagta
gaatcggttttggaaataattcaagaccaacgagaagaaataagagaagtactgagagaa
gaattatcgcaagtagactttgctatatcgagatatttcgaagagcaaaacgcaatatta
gatcaaacattatacgaagaaatgtcgcggcaatatgtattccgcaacaatctcggaaca
acgatcaaagaacaaatcgaaacggtactgccgggcctcgtcaaagacacaatagagccg
ctgaagcagcaacttaatttagactctacccgaatggacgaacttttaaaagaaaattta
acagaactgatcaatagcactcacgtaaaagatacgctcgcattggcagcggcaaatgga
gtgaaaccggcattagatgtggcatttaaagaagccttcacgaacgttcttttaccggga
atggagcaagcgtgtcaaacaatgttcagacaagtacaagatgcctttgttaagggtact
cacgaatatcttcaaaatgtagatgtaattacaagcaagcaataccaacaacgaaacgaa
caacaaagcgaagcgttgtctgcgctaatctgcgaggaattacaaaccgaattgaacaga
tgtttaactgctctgcaggaagaaacgatacgtacaattcacgattccgtcagagataat
ttaaaccaacaacttactgagattacgaatgcgcgttcgcgagcaactactcctgctata
ccagtacctggagttgccgatgttcaagcacgggttatgtctcttcttcaaagagggcat
ttaaacgctgcatttcagcaagctctaagtgcaagtgatttaggtttggtagtattagtt
tgtgaaaagacagaacccgcaagagtattttcccgcgctatgggaccccagggccaaagt
acaagatgtattttaccacaacccgtaattctttcacttgtacaacagttatctgcagac
ttagaacatcgtacagacctgaaacataggtggctcgaggaggcaatattaaacttggat
cctaatgatcccgtgacgcgagagcatatgggtacagtgttaactaccttacaaaatcaa
ttggctgcgtttgtagcaactaattcaaatagcatttctacccgacgtatgagaatgtta
gctatggctgcgcgcgcacttctaaatcaacatccttaa
DBGET
integrated database retrieval system
