KEGG   Colletes gigas: 122397219
Entry
122397219         CDS       T07492                                 
Name
(RefSeq) replication factor C subunit 5 isoform X1
  KO
K10756  replication factor C subunit 3/5
Organism
cgig  Colletes gigas
Pathway
cgig03030  DNA replication
cgig03410  Base excision repair
cgig03420  Nucleotide excision repair
cgig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122397219
   03410 Base excision repair
    122397219
   03420 Nucleotide excision repair
    122397219
   03430 Mismatch repair
    122397219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgig03032]
    122397219
   03036 Chromosome and associated proteins [BR:cgig03036]
    122397219
   03400 DNA repair and recombination proteins [BR:cgig03400]
    122397219
DNA replication proteins [BR:cgig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122397219
  DNA Replication Termination Factors
   ELG1-RFC complex
    122397219
Chromosome and associated proteins [BR:cgig03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122397219
DNA repair and recombination proteins [BR:cgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122397219
  Check point factors
   HRAD17(Rad24)-RFC complex
    122397219
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_14 RuvB_N AAA_11 AAA_assoc_2 ResIII RCF1-5-like_lid DUF815 AAA_16 AAA_5 AAA_7 AAA_24 AAA_30 DEAD PhoH AAA_19 bpMoxR ATPase_2 AAA_2
Other DBs
NCBI-GeneID: 122397219
NCBI-ProteinID: XP_043252172
LinkDB
Position
Unknown
AA seq 361 aa
MTVTPGTFQNLPWVEKYRPKKLDDLISHEEIIKTVNRFIDENQLPHLLFYGPPGTGKTST
ILACARKLYSSGQFNSMVLEMNASDDRGIGIVRGQILSFASTGTMYRSGFKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTKFRFGPLSANQIMPRLDDI
IKEENLNVTEDGKNALITLSGGDMRKVLNVLQSTSLAFGEVTEDNVYSCVGHPRPIDIKN
IANWLLNESYELCYCSILFVMYTKLLHLITLFLHTKLFIYSLTYRYTEIQDIKLKKGLAL
QDILTELHLFVNKIEFPDSILNDLVIKMAEIEKRVAIGCSETVQLNALVSAFQSARDIET
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgacagtaacacctggaacgttccagaatttaccatgggttgaaaagtatcgtccaaag
aaattggatgatcttatatctcatgaggaaatcataaaaactgtaaatagatttattgac
gaaaaccaacttcctcatctcttgttttacgggcctcccggaacagggaagacaagtacg
atacttgcgtgcgcccgtaaattatactcgtcaggccaattcaactcgatggtattagaa
atgaatgcttcggatgacagaggtattggtattgtcagaggacaaatactcagttttgca
agtactggtactatgtatagatctggttttaaattaatcatcctcgacgaagctgatgct
atgacaaacgatgctcagaatgctctcagaagaattatcgagaaatacacagacaatgta
cggttttgcatcatatgcaactacctcagtaaaattatccctgctcttcagtctcgatgc
actaaatttagatttggtccattgtctgcgaatcaaataatgccaagactggatgacatt
attaaagaagaaaatttaaacgtcacagaagatggaaagaacgcgttaataacgttaagc
gggggagatatgaggaaagttttaaatgttcttcaaagtacgtcacttgcttttggcgag
gtcacggaagataacgtttattcctgcgttggacatcctcgtcccatcgatatcaagaat
attgcgaattggttactgaacgagtcatacgaactatgttattgcagtatcctttttgtc
atgtatacgaaattattacatttaattaccttatttttacatacaaaactctttatatat
tccttaacataccgttacacagaaatacaagatataaaactgaagaaaggacttgcattg
caagatatactaacagaactccatttgttcgtaaataaaattgaattcccggactcgatt
cttaacgatttagtgataaaaatggcagaaattgagaaaagggtagctatcggttgcagc
gaaacggtacaattgaatgcccttgtttcagcatttcaaagcgctcgtgatatcgaaacc
tcgtaa

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