Colletes gigas: 122397278
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Entry
122397278 CDS
T07492
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122397278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122397278
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122397278
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122397278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122397278
NCBI-ProteinID:
XP_043252304
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MANLNFEQPPRSIANASLTSRAGGGGGLNSSTLTGHVTPTSGMFSGSSTSTSSSANSAVV
ITNVYPGASGAGGGQANHQPQQQQLSPMGSRGLFGQRAFTDRRTMPALGTSNPMGSMGTF
GIPQSRNYGSQGQINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPG
KQPYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSISGDKSIPVGLGPEIGQD
VLQANRAPGSEKSQSSKRGIQTSPDGKVTNIPASMVKDQFGMVGLLTFIRAAETDPNLVS
LALGQDLTALGLNLNSPENLYQNFGGPWAETPCRPQDIDFHVPPEYLINAAIRDKLAPVK
LNRYKDDLLFYMFYTNVGDMLQLAAAAELYSREWRYHMEEKVWITQAPGLGLVEKTSTYE
RGTYYYFDAQSWRKVAKEFHLDYTKLESRPHLPTNFHQTQP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgaactttgagcaaccgccacgcagtattgcgaacgcaagtcttacatca
cgtgcgggtggtggtgggggtttaaattcatcgaccctgacgggccatgttacacctacc
tcgggcatgttctcaggctcatctacaagcacgtcaagttcggctaattctgcggtagta
attactaacgtttaccccggagcatcgggtgcaggtggtggacaagctaatcatcaacct
cagcagcaacagctctctcctatgggcagcaggggactgtttgggcagagagctttcaca
gatagacgtacgatgcctgctcttggaacctcaaatccaatgggtagcatgggcactttt
ggaataccgcaaagtcgtaattacggatctcagggacaaattaataattttcactctgtt
ttcggcagtggaggaggtggagatacaagtactcctccattgttggatctgtccgagttt
ccttcattaacaaacagaggacagggtgattctatgccgcaacctagtcctatgccagga
aaacaaccttatgttggaatggtaaaacaaccgacgtccgaatcaagcgagtttactatg
agttctgaagatttcccagcattaccaggaacacaaaatagagaaggaccatcaccaggt
ggaagcatatctggtgataagagcatacctgtcggacttggccctgaaattgggcaagac
gtcctgcaggcgaatagagcacctggatctgaaaagtctcaatcatctaaaagaggcata
caaacatctcctgatggtaaagtaactaatataccagcaagtatggttaaggatcagttt
ggaatggttggacttttaacgtttattagggcagcagaaacagatcctaatttagtatct
ttggcattaggccaagacttaacagcgttaggattaaatcttaattcgccagaaaatctt
tatcaaaattttggtgggccttgggctgaaacaccgtgtcgacctcaagatattgatttt
cacgtgccaccggaatatctcattaatgccgctatcagagataaattagcgccggttaag
ttaaatcggtacaaggatgatctactattttatatgttttatacaaatgttggggatatg
ctgcaattagcagcggcagcggagttgtacagtagggagtggcgatatcatatggaagaa
aaggtatggataacgcaagcaccaggattagggcttgtagaaaaaacttcaacatatgaa
cgtggtacttattattattttgatgcgcaaagttggagaaaagtagcaaaggaatttcat
ttggattatacaaaactagaaagtagacctcatcttcccacaaactttcaccaaacccag
ccttga
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